Pedobacter ginsengisoli: CPT03_20020
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Entry
CPT03_20020 CDS
T05145
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pgs
Pedobacter ginsengisoli
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_50
HTH_11
Mg_chelatase
Mga
AAA_16
ATPase
HTH_29
HTH_17
HTH_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ATP58588
UniProt:
A0A2D1UAD5
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Position
complement(4767013..4768248)
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AA seq
411 aa
AA seq
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MDVQDIKNRFGIIGGSPLLNRAIDIARQVAPTDMSVLITGESGSGKEVFSHIIHQMSTRK
HGAFIAVNCGAIPEGTIDSELFGHEKGSFTGAHEARKGYFEVANGGTIFLDEVAELPLGT
QARLLRILESGEYLRVGSSKVQKTDVRIIAATNVDVYNRVKSGKFREDLYYRLNTVPLRI
PALHERKEDIYLLFRKFAADFSDKYRSPGIQLEPEAIQILSNYSWPGNVRQLKNIAEQIC
VLEKERNVSATALLNYIPNESATNLPVAINGSSKEDYTERDILYKVLFDMKKDMMELKKL
VAEIIQSGGNTSHIMADNPHYINQLYQEVDQTFGSEQPTLTIKKPVQNAPVDYNYTHEAE
EVEESLSLIDKESDLIKKALRKHKGKRKFAAQELGISERTLYRKIKELNLN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttggacgtacaagacataaaaaatcgttttgggataattggtggttctccactattaaac
cgggctatagatattgccaggcaggttgctccaaccgacatgtctgttttaattaccggt
gaaagtggtagtggtaaagaggttttctctcacatcattcaccagatgagtacgcgcaaa
cacggggcttttattgcagtgaactgcggtgctattcctgaaggaactattgactcggaa
ttattcggtcacgaaaaaggatcttttaccggggcacatgaggcccgtaaaggctatttt
gaggtagcaaatggtggtactattttccttgatgaggttgcggaattaccattaggtact
caggctcgtctgttacgtattctcgagagtggtgaataccttagagttggctcttctaaa
gtacaaaaaacagatgtgcgaattattgcagcaactaacgttgatgtttataatcgtgta
aaatccggcaagttccgcgaagatttatattatagattaaatactgttcccttgcgtatt
cctgctttgcacgagcgcaaagaggatatttatttattatttagaaagtttgccgcggat
tttagtgataagtaccgcagccccggcatacagcttgagcccgaagcaatacagatacta
agcaattacagctggcctggaaatgtaaggcaactaaaaaatattgctgaacaaatctgc
gttctcgaaaaagaaagaaatgttagtgcaacggctctactgaattatattccaaatgaa
agtgccaccaacctacctgtagcaattaatggcagtagcaaggaagattataccgaaaga
gatattctttacaaggtactttttgatatgaaaaaagacatgatggaattgaaaaaactg
gttgccgaaatcatccagagcggaggtaatacttcgcacatcatggctgacaatcctcat
tacattaatcagctttaccaagaggtagatcaaacttttggtagtgagcaaccaactctt
actattaaaaaaccagttcaaaacgcaccggttgattacaactatactcatgaagcagaa
gaagttgaggaatcattatcattaatagacaaggaatctgacctgattaaaaaagcactg
agaaagcataaaggaaaacgcaagtttgctgctcaggaattaggtatctctgaacgtaca
ttatatagaaaaattaaagaactgaatttaaattaa
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