Pedobacter ginsengisoli: CPT03_20450
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Entry
CPT03_20450 CDS
T05145
Name
(GenBank) peptidase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00550
Peptidoglycan biosynthesis
pgs01100
Metabolic pathways
pgs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPT03_20450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPT03_20450
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgs01003
]
CPT03_20450
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgs01011
]
CPT03_20450
Enzymes [BR:
pgs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CPT03_20450
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CPT03_20450
Glycosyltransferases [BR:
pgs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CPT03_20450
Peptidoglycan biosynthesis and degradation proteins [BR:
pgs01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CPT03_20450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ATP58665
UniProt:
A0A2D1UAN6
LinkDB
All DBs
Position
complement(4869756..4871978)
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AA seq
740 aa
AA seq
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MRKTLSQEDIRKYNFTLWKLLIGGIVLFALFIVCIGFGLFGELPSFRDIEHPKSNQASEI
VTDDGKVLGTYFVQNRSNVTYPEISPNVINALIATEDIRFREHSGIDFKRTFTIFLYAIV
GKKQGGSTITQQLALNLFSEEGRQKNFAKRILQKFQEWVIAVKLERNYTKEEIIVMYLNT
VDFGNQAYGIKSAARVYFNTTPDKLSVSQAATLVGILKGITRYSPTRNPERSLARRNTIM
GLMLKEDLLTQQQFDAEQQKPLGLRFSAATVNDGIAPYFRAVLKNDIRRIFEERSITKPD
GTPYDLDRDGLKIITTLNYDMQVAAEDAQKEYMKTLQQSFINSWKGRNPFKGKEAQIEQG
VKRSDRYKALQLEGKSDAEIKEDFNTPTRLTIFTWKGNIDTLMKPIDSVKYYKMLLRNAM
MAMDPQTGYVKAWVGGINFEHFKYDQVKMGTRQVGSTAKPFTYAVAVENGYSPCFSVLNE
PVTIETPGSPPWTPRSGGTVPGYLTLQKGLALSQNYIAAYLMKQVGPTAVATLAKKMGIT
SEVPAYPSIALGSFDASVYDMVGAYSVFANKGIWTKPIYILRIEDKNGVVLHSEKPIPVP
AMNEEVAYVMTRMLRGVVTNGTGWRLAGRFGIKTPIGGKTGTTQNNSDGWFMGISPQLVA
GVWTGCEDRAFHFTSTAQGDGATTALPIFAGFMKRVYANPKLNISKADFEPPKNGVSITF
DCNQYQQQEQKTELDEKLGF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaacactttcgcaggaagacatcagaaagtataactttacattatggaaatta
ttaattggcggaatagttctttttgccctttttatagtttgcatcggatttggactattt
ggagagctcccatcattcagagatattgaacacccgaaaagcaatcaggcctcagaaatt
gttactgatgatggtaaagtattaggcacttattttgtacaaaaccgttcaaatgttact
tacccggaaatctcaccaaatgttattaacgcactgatagcaactgaggacatccgattc
agagaacattcaggtatcgatttcaagcgtacattcaccatatttctttacgccattgtt
ggtaaaaaacaaggaggcagtacaatcacacagcagcttgcactaaacctattttctgaa
gaagggagacaaaaaaactttgccaagcgtattttacaaaaatttcaggaatgggttata
gccgtaaaattagaacggaactataccaaagaggaaattattgtaatgtatctaaacact
gtagattttggcaatcaggcatatggtatcaagtcggctgcccgtgtatattttaatact
actccagataaacttagtgtttcacaagctgctacccttgtaggaatcctaaaaggtatt
accagatactcgcctacccgcaacccggaacgttccctggccagaagaaatacaattatg
ggtctgatgcttaaggaagacctgcttacccaacagcaatttgatgcggagcagcaaaaa
ccacttggtttaaggtttagtgccgcaacagtaaacgatggaattgcaccgtatttcaga
gctgtattaaaaaacgatatcagacgaatatttgaagaacgatctataacaaaacctgat
ggaaccccatatgacctggatagagatggtttaaaaataattactaccctaaactacgat
atgcaagttgcggctgaagatgcacaaaaagaatatatgaaaactcttcagcagtcattt
atcaatagttggaaagggcgaaatccttttaaaggaaaagaagcccagatagaacaagga
gttaaaagatccgacaggtataaagctttacaacttgaaggtaaatcagatgcagaaatt
aaagaagactttaacacacctacccgcctaaccatctttacctggaaagggaacatagat
acattaatgaagcctatcgattcagtaaagtattacaaaatgcttttaaggaatgcaatg
atggccatggatccgcaaacaggatatgttaaagcatgggttggcggtatcaattttgag
catttcaaatatgaccaggtcaaaatgggtaccagacaagtaggctcaactgcaaagcca
tttacctatgcagtagcagtagaaaatggatactctccgtgcttttctgtacttaatgaa
cccgttacaatagaaactcctggaagtccgccttggactccacgttcaggaggtacagtg
cccgggtacttaaccctgcaaaaagggcttgcactttctcaaaactatattgccgcttat
ctgatgaaacaagtaggcccaactgcagttgccacacttgctaaaaagatggggataacc
tcagaagtacctgcatatccatccatagccctgggctcttttgatgcctccgtttatgat
atggtaggagcctacagtgtttttgcaaataaaggtatctggacaaaaccaatctatatt
ttaagaatagaagataagaacggagttgttttacacagtgaaaaaccaatcccggttcct
gcaatgaatgaagaagttgcctacgttatgacccgcatgcttagaggtgtagtaacaaac
ggaacgggctggagattagctggcagatttggaattaaaactccaattggtggcaaaaca
ggaacaacacaaaacaactcagatggatggtttatgggtatcagtccacaattagttgcc
ggggtatggacaggttgcgaggatagagcattccattttacaagtacagcacagggagat
ggagctaccacagcccttcctatatttgccggcttcatgaaacgtgtgtatgcaaatcca
aaattaaatatttctaaagcagattttgagcctcctaaaaatggtgtttctattaccttt
gattgtaaccaatatcaacaacaggaacaaaaaactgaacttgatgaaaaactaggtttc
taa
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