Pedobacter ginsengisoli: CPT03_21095
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Entry
CPT03_21095 CDS
T05145
Name
(GenBank) transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgs03000
]
CPT03_21095
Transcription factors [BR:
pgs03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CPT03_21095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
CggR_N
RepL
HTH_41
MarR
HTH_5
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ATP58783
UniProt:
A0A2D1UB03
LinkDB
All DBs
Position
complement(5007781..5008545)
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AA seq
254 aa
AA seq
DB search
MINIAERHQYILNKIQVNGSLDVQSLCKELDVSSVTIRKDLKLLEDKNLLFRTHGGATLN
NPYTVDKPVNEKEHLQSAEKVRIGTLAAELIEDNDSIIIASGTTVLALARCIKPKGALTV
ITSALNVALELVHHSNIEVIQLGGLLRKSSSSVTGPYSDNVLGNVFCSKLFLGVDGIDLE
FGLTTTNAFEAHLNRQMIDSSQKIIVLADSTKFGKRGFGRICGIEEVDHIITDSGISEHT
VKHLESMGIKISII
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgattaacattgcggaaagacaccaatatattttaaataagattcaggttaacggatcg
ctcgatgttcaaagcctgtgcaaagaactcgacgtttcatctgttacaatacggaaggat
ctgaaactcctcgaagataaaaacctgctgtttagaacacatggaggggcaactttaaac
aatccgtacacagtagacaagcctgttaatgaaaaagaacaccttcaatctgcagaaaaa
gtaagaattggaacccttgctgcagaactgatagaagacaatgattctatcattatagca
tccggaactactgttctggcactggcaagatgtattaagccaaaaggagctttaacagta
attacatcggcattaaatgttgcccttgaacttgtacaccattctaacatagaagtaatt
cagctaggcggattgctaagaaaaagctcatcatctgttaccggcccctattcagacaat
gtattgggaaatgtattttgcagcaaactatttttaggggtagatggaatagaccttgaa
tttggcctcaccacaacaaatgcctttgaagcccacctaaaccgacaaatgatagattca
tctcaaaaaataattgtcctggccgattcaactaaatttggcaaacgtggtttcggcaga
atatgcggtatcgaagaagtagaccatatcattaccgacagcggtatttccgaacataca
gtaaaacatcttgagagtatgggaataaaaatatctataatttaa
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