Pedobacter ginsengisoli: CPT03_21595
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Entry
CPT03_21595 CDS
T05145
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00020
Citrate cycle (TCA cycle)
pgs00640
Propanoate metabolism
pgs00660
C5-Branched dibasic acid metabolism
pgs00720
Other carbon fixation pathways
pgs01100
Metabolic pathways
pgs01110
Biosynthesis of secondary metabolites
pgs01120
Microbial metabolism in diverse environments
pgs01200
Carbon metabolism
Module
pgs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CPT03_21595
00640 Propanoate metabolism
CPT03_21595
00660 C5-Branched dibasic acid metabolism
CPT03_21595
09102 Energy metabolism
00720 Other carbon fixation pathways
CPT03_21595
Enzymes [BR:
pgs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CPT03_21595
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Ribul_P_3_epim
DapB_N
Motif
Other DBs
NCBI-ProteinID:
ATP58878
UniProt:
A0A2D1UB69
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All DBs
Position
5109746..5110618
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AA seq
290 aa
AA seq
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MSVLVNKDSKVIVQGFTGNEGTYHASQMIEYGTNVVGGVTPGKGGQTHLDKPVFNTVKDA
VDKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPTKDMIQVKEYISDRDCRLI
GPNCPGVITADEAKIGIMPGFIFKKGTVGVVSKSGTLTYEAVDQVVKAGLGITTAIGIGG
DPIIGTTTKEAVELLMNDPETEGIIMIGEIGGGMEAEAARWIKENGTKPVVGFIAGQTAP
AGRRMGHAGAIVGGADDTAAAKMKIMAECGIHVVASPAEIGEAMAAQLKK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttagtaaataaggattcaaaagttattgttcaaggctttacaggaaatgag
ggtacttatcatgcttctcaaatgattgagtacggaacgaacgttgttggcggtgttaca
ccaggtaaaggtggccagactcatttagataaaccagtatttaatactgtaaaggatgcg
gttgataaggccggtgctaatgtatctattatatttgttcctcctgcatttgctgctgat
gctatcatggaagctgcagaagcaggtattaaagttattgtttgtattactgaaggtatc
cctactaaggatatgattcaggttaaagaatatatttctgacagagattgtcgcttaatt
ggacctaactgtccaggtgttatcactgctgatgaagctaagataggcattatgccaggt
ttcatctttaaaaaaggtactgttggtgtagtttctaaatctggtactttaacctacgag
gctgttgatcaggtagtaaaagcaggtttaggtattactactgctattggtattggtggt
gacccgattattggtacaactactaaagaagcggttgagttgttgatgaacgatccggaa
actgaaggtatcatcatgattggtgaaattggtggtggtatggaagctgaagcagcacgt
tggattaaagaaaatggtacaaaacctgttgtgggttttatagctggtcaaactgctcct
gccggacgtagaatgggtcatgctggtgctattgttggtggtgctgatgatacagccgct
gcaaaaatgaaaatcatggctgaatgcggtattcatgttgtagcaagccctgctgaaatt
ggagaagctatggccgctcagttaaagaaataa
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