Pedobacter ginsengisoli: CPT03_21700
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Entry
CPT03_21700 CDS
T05145
Name
(GenBank) DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPT03_21700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_21700
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CPT03_21700
DNA repair and recombination proteins [BR:
pgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPT03_21700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
OGG_N
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
ATP58895
UniProt:
A0A2D1UBC5
LinkDB
All DBs
Position
5130810..5131712
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AA seq
300 aa
AA seq
DB search
MNKQIIAIEVPGNFDFQECLWFLDRNFDDCMHKVDADRVIKVIEIEGKQLLVSVAFYEGQ
LQIEVLLGNLELPGVEKLKEFITDWFDLEKDMESFYRLLKNDERLAYMITSYSGLRLIGI
PNLFEAICWAIIGQQINLTFAYKLKRRLVEKYGICVPFNGVNYYVFPGFEILATLCADDL
KEMQFSRSKAEYLIIIAKAFANGEISKDKLLALPDLSARQKALNNIKGIGVWTANYALMK
SLKEHSCIPYGDAGLLNSLLNHNIITDKKQHTEIQTFFKDYPRWESYMVFYLWRSLSKKE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacagatcatagctattgaagtccctgggaattttgattttcaagaatgtttg
tggtttttggataggaactttgatgattgcatgcataaggttgatgcagatcgggttata
aaggttattgaaattgaaggtaagcagttattggttagtgtagctttttacgaaggtcaa
ttgcagattgaagtgcttttaggtaatttggaactacccggtgtagaaaagcttaaagaa
tttataactgactggtttgatcttgaaaaggatatggaatccttttatcgattactaaaa
aatgatgaaaggctagcttatatgatcacttcctatagtgggctgcgtttaataggaatt
cctaatttatttgaagcaatttgttgggcaataatagggcaacaaatcaatttaaccttt
gcatataaattaaaaaggcgcttggtggaaaagtatgggatctgtgttccatttaatggg
gttaattattatgtgtttcctggttttgagatattggcaacgctttgtgctgatgatttg
aaagaaatgcaattttcaagaagtaaagccgaataccttattattattgctaaagccttt
gccaatggagaaataagtaaagataaattgctcgctttgccagaccttagcgcacgacaa
aaagctttgaataatatcaagggtattggcgtttggactgcaaactatgcccttatgaaa
tctttgaaggaacactcatgtattccttatggggatgcaggacttctcaattctttgcta
aaccataacatcattacagataaaaaacagcatacagaaattcagacattttttaaagat
tatccgagatgggaaagctatatggtattttatctgtggagaagcctctcaaaaaaagaa
taa
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