Pedobacter ginsengisoli: CPT03_21745
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Entry
CPT03_21745 CDS
T05145
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03030
DNA replication
pgs03430
Mismatch repair
pgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPT03_21745
03430 Mismatch repair
CPT03_21745
03440 Homologous recombination
CPT03_21745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgs03032
]
CPT03_21745
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_21745
Enzymes [BR:
pgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPT03_21745
DNA replication proteins [BR:
pgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPT03_21745
DNA repair and recombination proteins [BR:
pgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPT03_21745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_2
TIP49
Rad17
RNA_helicase
AAA_24
AAA_30
DNA_pol3_delta_C
AAA_18
VapE-like_dom
AAA_7
PIF1
AAA_19
AAA_33
AAA_assoc_2
RnlB_antitoxin
nSTAND3
ResIII
AAA_16
QueC
Motif
Other DBs
NCBI-ProteinID:
ATP58902
UniProt:
A0A2D1UB97
LinkDB
All DBs
Position
complement(5140342..5142162)
Genome browser
AA seq
606 aa
AA seq
DB search
MENFIVSARKYRPATFETVVGQHHITGTLKNAIKNNQLAQAFLFCGPRGVGKTTCARILA
KTINCTNLTDDQEACGACDSCVSFQTGHSFNFHELDAASNNSVDDIRSLIEQVRIPPQAG
KYKIYIIDEVHMLSANAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
QVDDISGHLNKIAQRENISVEADGLHIIAQKADGGLRDALSMFDQIVSYTNKNLTYKSVI
DNLNILDYDYYFKLTQSLTSADVSNALILFDEILNNGFDGNNFINGLAGHLRNLLVAKDP
QTTKLLEVSENIKQKYISQSQQTPVSFILTALNLANQCDLNYKNSKNQRLQVELALIKMC
HIPSVLQLAQQPNNHSATDTDQIKKKTNVSSSEPAKNVVAEIENKAPEPVKLSEVAPLPK
QDPSPLPSIPVTKTINTAPATKIALKPLAEIKKVATLIPSLNDIGRVSDEEDGDEPKYIS
GNLREAFTYEQLLALWTQYANKAKDDGKINIYTLLSSSDPILDSSEEIIVHVEHKLQEGL
LQEEMIDFLNFLRPNLKNFSITIKAKQVARTVVNRLYTNTEKYQYMIEKNPKLEEMRKRF
NLDVNS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttatagtatcagcccgtaagtatcgcccggcaacgtttgaaaccgttgtt
ggacaacatcacattactggtacgctaaaaaatgccattaaaaacaatcagctggcccag
gcatttttattctgcgggcctcggggtgtaggaaagactacttgcgcccgtattttggct
aaaactataaattgtactaatttaactgatgatcaggaagcttgtggagcatgtgattca
tgtgtttcgttccaaaccggtcactcatttaattttcatgaactcgatgctgcatcaaat
aactcggttgatgatatacgtagtttaattgaacaggtccgtatcccgccacaggccggt
aaatataaaatctatattatagatgaggttcacatgctatctgctaatgcctttaacgca
tttctgaaaacgcttgaagaaccaccatcttatgccatttttatattagctaccactgag
aagcataaaatactgcctactattttatcaagatgtcagatttttgattttaataggata
caagttgacgatatatctgggcatcttaataagattgcacagcgtgagaatatttctgtc
gaggctgatggattacatattatagcacaaaaggctgatggtggtttaagagacgcgctc
tctatgttcgatcagattgtaagttataccaataaaaatctaacctacaaatctgtaata
gacaacctgaatattcttgattacgattattattttaaacttactcagagcttaacaagc
gcagatgttagcaatgcgttaattttatttgatgaaattttaaataatggttttgatggc
aataattttataaacggattagccggccatcttcgtaatctactggttgctaaagatcct
caaactaccaaacttttagaggtaagtgaaaatattaaacagaagtatatttctcaaagt
cagcaaacgcctgtttcatttatacttactgcattaaaccttgccaaccagtgtgatctt
aattataagaatagcaaaaatcaacggctgcaggtagagctggctttaataaagatgtgc
cacatcccttcggtacttcaactagcccagcagcctaacaatcactccgcaactgacaca
gatcagattaaaaaaaaaactaatgtaagttccagcgaacctgcaaaaaatgtagtagca
gagattgaaaataaagcaccggaaccagttaaactttcagaagttgcaccattgccaaaa
caagatccgtctcctcttccttcaattcctgttacaaaaacaatcaatacagcacctgca
acaaagattgcactgaaaccgctagctgagataaaaaaggtggccacattaataccatcg
ttaaacgacattggccgcgtatcagatgaggaagatggtgatgaaccaaaatatataagc
ggtaacttaagggaggcttttacttatgagcagttattagctctgtggacgcaatatgca
aataaggcaaaagatgatggtaagataaacatatatactttacttagcagttcagatcca
atacttgattcttcggaagaaattatagttcacgttgaacacaaactgcaggaaggctta
ttacaggaagaaatgattgattttcttaattttttaaggccaaacctaaaaaacttcagc
attacaattaaagctaaacaggtggctagaactgtagtgaacaggctttacaccaatacc
gaaaaataccagtatatgattgaaaagaatcctaaactggaagagatgcgcaaacgcttt
aatcttgatgttaattcttaa
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