Pedobacter ginsengisoli: CPT03_22050
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Entry
CPT03_22050 CDS
T05145
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPT03_22050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgs01007
]
CPT03_22050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgs03016
]
CPT03_22050
Enzymes [BR:
pgs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CPT03_22050
Amino acid related enzymes [BR:
pgs01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CPT03_22050
Transfer RNA biogenesis [BR:
pgs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CPT03_22050
Prokaryotic type
CPT03_22050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ATP58960
UniProt:
A0A2D1UBG6
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All DBs
Position
5198682..5201081
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AA seq
799 aa
AA seq
DB search
MKISYNWLKQFIQTDKTPQELSLILTNIGLEVESLETVQPVAGGLAGLVIGHVLTCVQHP
NADRLRVTTVDVGGPDILQIVCGAPNVAQGQKVVVATVGTTVYPNEGEPFKINKSKIRGE
VSEGMICAEDEIGLGVSHDGILVLPADTTIGISAKEYFKLEDDYLFEIGLTPNRADAASH
LGVARDLAAYFRSSIQMPDVSGFKTNNENLKIEVKVEDTNACPRYSSVTISGVTVTTSPE
WLQDKLKVIGIRPINNIVDITNYVLHDLGLPLHAFDADQIKGAKVFVKKCAEGTPFVTLD
GVERKLSADDLMICNAEEPMCIAGVFGGKSSGITEDTKNVFLESAYFDSVSVRKTAKRHG
LKTDASFRYERGADPEITTFALKRAALLIQELAGGEIASSVSDIYGNPIRSFDVEVSYKN
INKLIGANIPDAEIKSIITALGIEVAKETAESLELKVPSFKVDVTRECDITEEVLRIYGY
NNIEIPSKINASLSYGAKPDREQTQHVIADMLTANGFLEIWCNSLTKGAYSKVPEEAVQI
LNPLSSDLNVMRQELLLPALESVAYNQNRKTADIKFYEFGKTYHLINDKYVERPRLLILL
SGANQSEQWNHKANPVSFYNLKAAVDAVIGRLGITNYQTEEVKNESFAFGLKYFRGDKAI
VTFGAVTAADKKKADIDKDVYYADFDWAQLLDIVKKNRIINKEVPKYPSVRRDLSMLVDT
NVTFDDLKAIAFKTEKKLIKNVQVFDVYVGDKLPAGKKSYALNFTLQDEEQTLTDKQIDS
VMQKIISNLAQTAKAEIRK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcatacaattggcttaaacaattcatacaaactgataaaacacctcaggaa
ctttctcttatattaacaaatattgggctggaagtagaaagcttagaaaccgtacagcct
gttgctggtggtttagccggattggttataggtcatgtattaacttgtgtacaacaccct
aatgcagatcgccttcgtgtaacaacagttgatgttggcggacctgatattttacagatt
gtatgtggtgctccaaatgtagcccagggccaaaaggttgtggtggctaccgttggcact
acagtttatccaaatgaaggggagccttttaaaattaataaatcaaaaataagaggagag
gtatcagaggggatgatctgtgccgaggacgagattggtttgggggtttctcatgacgga
attcttgttttaccggcagacacgacaataggtatttcggctaaggaatattttaaattg
gaagatgattacctttttgagataggtttaacccctaacagggccgatgctgcctctcat
ttaggtgtagcaagagatttagctgcatatttccgtagcagtattcaaatgcctgatgtt
tctggttttaaaaccaataacgaaaatcttaagatcgaagttaaggttgaagatacaaat
gcttgtccgcgctatagcagtgttaccataagtggtgttacagttacaacatcgccggag
tggcttcaggataaattaaaagtaattggtatcagaccaatcaataacatagttgatata
accaactatgttttacacgatctgggtttgccacttcatgcttttgatgctgatcagata
aaaggggctaaagtttttgttaagaaatgtgctgagggaacaccttttgtaacgcttgat
ggagttgaacgtaagctttctgcagacgatttgatgatctgtaatgccgaagaaccaatg
tgtatagctggagtttttggaggtaaaagttcaggaataactgaagatactaaaaatgtt
ttcctggaaagtgcttatttcgactctgtttctgtgcgtaaaacagctaaacgccatggc
ttaaaaacggatgcttcgttcaggtatgagcgaggtgctgatccggagataacaaccttt
gctttaaaacgtgcagcattgttaattcaggaattggcaggtggcgaaatcgcttcatca
gtttcggatatttacggtaatcctataaggtcttttgatgttgaggtaagctataagaac
atcaataaattaataggggccaatattcctgatgcagaaattaaaagtataattacagca
ttaggtattgaagtggctaaagaaacggcagaaagtttggagcttaaagtacctagtttt
aaagttgatgtaacccgggaatgcgatatcactgaagaggttttaagaatttacggctat
aataatattgagatacctagtaaaataaatgcatcattatcttatggtgctaagccagac
agagagcaaacgcagcatgttattgctgatatgttaactgcaaatggctttttagagatc
tggtgtaattcattaactaagggcgcttattcaaaagttcctgaagaagcagtacagatc
ttaaatccattaagttcagatttaaatgtaatgcgtcaggaattattgttgcctgcatta
gagagtgtcgcttataatcagaacagaaaaactgctgatattaaattttatgaatttggt
aaaacctaccatttaataaatgataagtatgtagagcgcccaaggttgttaattttatta
tcgggtgctaaccaatctgagcaatggaaccataaggccaatccggtaagtttctataat
ttaaaagctgcagttgatgcagttattggtcgtcttggtataacgaattatcaaaccgaa
gaggtaaagaatgaaagttttgcttttggtttaaaatactttagaggtgataaagcaatt
gtaacttttggagctgtaacagctgcagataaaaagaaggctgatattgataaggatgtt
tattatgccgattttgactgggcacagcttttagatattgtaaagaaaaatagaattata
aataaagaggttcctaagtacccatcagtaagaagggatttatcgatgctggttgatacg
aatgtaacttttgatgatttaaaagctattgcatttaaaacggaaaagaaactgattaag
aatgtacaggtgtttgatgtatatgtaggagataaattacctgccggaaaaaaatcttat
gcacttaattttacccttcaggatgaagagcaaacattgaccgataaacagattgattct
gttatgcaaaagattatatctaacttagcgcaaacagcaaaagcagaaatcagaaaatag
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