Pedobacter ginsengisoli: CPT03_22470
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Entry
CPT03_22470 CDS
T05145
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pgs03029
]
CPT03_22470 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_22470 (bamA)
Mitochondrial biogenesis [BR:
pgs03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
CPT03_22470 (bamA)
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_22470 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
DUF4944
Motif
Other DBs
NCBI-ProteinID:
ATP59033
UniProt:
A0A2D1UBR0
LinkDB
All DBs
Position
5285526..5288015
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AA seq
829 aa
AA seq
DB search
MAQITRPSNTAPPTLKVKGLDLDYFNPKEYIIGGVTLTGTHFIDKEVIITLSKLIKGESI
VLPGEATANAIKTLWAQGLFDDVQLDIAKIVEDTVYFDIEVVERPRLSSFEINGVSKSQK
TDILEKLNEKSGKSIINDNLYNSTTATIKKFLLGKGYFFTTVEYKTKPDPSLENGMVLQV
FVDKGRKVKVHEINFSGNKDFSSAKLRKFLKKTKQQAFYKVFGSGKFNKEKYDEDKVTLI
AKMQDKGYRDAVILKDSIYQYSDKAIGINIEVYEGPKYYFGDISWAGNAKYTTDILEKTL
GIEKGEVFSEEKLEKKLRGSANGDDVSSIYLNDGYLTFNVDPVQTKIHGDTVDVEMRIYE
GPQYTNNRITLKGNTITNDRVVLREIRTKPGEKFSKDLLIRTVREIGQLGNFDESKTVPT
PKPNPADGTVDIEYAVEEKPSDQIELSGGFGGGNIIGTLGLTFNNFSLKNIFNLDSYKPL
PKGDGQKLSLRGQTNGKYYQSYSFSFSEPWLGGKKPISFGVSAFTSLQSNGLKAADSRFQ
KIRLNGVTVSLGRRLNFPDNYFQLTHAINVQQYILNNYPGYLFSTGTSYNLNLTQELSRD
SRNHQIFPTEGSFFRFTVQATPPYSLLNNINYATASDKQRYKFTEYHKWKFESQWFQRLA
GKFVVMAQAQFGFLGTYNSAVGESAFERFKLGGDGMQGFDFLQGSEVIKMRGYANNAVIP
QGSNATIAQNSGSPIFTKYVMELRYPVIASQQATAFILAFAEGGNTWNKFGDFNPFNVRR
TAGIGARIFLPIFGMLGIDYGHAFDKIPGITDGGRQNFTFSIAQQLGGL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcacagattacccgaccgtccaatactgcaccgcctacccttaaagttaaggggctg
gatttggattattttaatccaaaagagtacattattggaggggttacacttactggaact
catttcattgacaaggaggtaattattactttatctaagttaattaagggcgaaagtatt
gttttgcccggagaggctacagccaatgcaataaaaactttatgggctcagggcttattt
gatgatgtgcagttagacatagctaaaatagttgaggatactgtttattttgatattgaa
gtagttgaacgacctcgtttaagttcatttgaaattaatggtgtaagtaagtcgcaaaaa
actgatattcttgaaaaattaaatgagaaaagtggtaaatctattatcaacgacaatcta
tacaattcaacaactgcaacaataaagaaatttcttttgggtaaaggttacttctttact
actgttgagtataaaaccaaacctgatccgagtttggagaacggaatggttttgcaagta
tttgttgataagggtaggaaagtaaaagttcatgagataaacttttcaggaaataaggat
ttttcatcagctaagctgcgtaagttcttgaagaaaacaaaacagcaggcgttttataaa
gtatttggctccggaaaattcaataaggagaaatatgatgaagataaagtaacacttatt
gcaaaaatgcaggataagggttatcgtgatgccgttatccttaaggatagcatttatcag
tatagcgataaggccattggcattaatatcgaagtatacgaaggtcctaaatattatttt
ggtgatattagctgggctggtaatgctaagtatacaactgatatattagaaaaaacactt
ggtattgaaaaaggcgaagtatttagtgaagaaaagctggaaaagaaattaagaggcagt
gccaacggggatgacgtttcaagtatttatcttaatgacggttatttaactttcaacgtg
gatccggtacagactaaaattcatggcgatactgtagacgttgaaatgcgtatttatgaa
ggaccacagtataccaataaccgtattactttaaaaggaaataccattacaaatgatagg
gtagtactaagagagatccgcacaaaaccgggagaaaagttctctaaagatctattgatc
cgtactgttcgcgagatcggacaattgggtaactttgatgaatctaaaacggttcctacc
ccaaaaccgaatccggcagatggtacagtagatatcgagtatgcagtagaagaaaagcct
tcagatcagattgaattatcaggtggttttggtggtggtaatatcatcggaacactaggg
cttacatttaataacttctcattaaaaaatatatttaatctggattcttacaaacctttg
cctaaaggggatggacagaaattaagtcttcgtgggcaaacaaatggtaagtattatcaa
tcttacagtttctctttctctgagccttggcttggtggtaagaaaccaatcagttttggt
gtaagtgcttttacatcattacaatcaaatggtttgaaagctgctgatagcaggttccaa
aagattcgattaaatggtgttactgttagtttaggaagaagattgaattttcctgacaac
tatttccagttaacccatgctattaacgttcagcaatatattttgaataattatccgggt
tatttatttagcacaggtacttcttacaacctaaacttaactcaggagctttccagagat
tcgagaaatcatcagattttcccaactgagggttcattctttagattcactgttcaggca
actcctccttattctcttttgaacaatataaactacgcaacggcgtctgataaacaacgt
tataagtttactgaatatcataaatggaagttcgaatctcaatggttccaaagactggct
ggaaaattcgttgtaatggcacaggctcagtttggtttccttggaacatataattcggct
gttggtgaatcagctttcgagcgtttcaaattagggggtgatggtatgcagggatttgat
ttcttacaaggttcagaagtaattaaaatgcgtggatatgcaaataatgcagttattcca
caaggatcgaatgcaactattgcacagaattctggaagtcctatctttaccaagtatgtt
atggaattgaggtatccggttattgctagccagcaagcaacagcttttatcttggcattt
gctgagggtggtaatacctggaacaagtttggtgattttaatccgtttaatgttagaaga
acagcaggtattggtgctagaatatttttaccgatatttggaatgttgggaattgattat
ggtcatgcctttgataaaattccaggcattactgatggcggaagacaaaactttaccttc
agtattgcacaacaattgggaggactttaa
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