Pedobacter ginsengisoli: CPT03_22505
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Entry
CPT03_22505 CDS
T05145
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00240
Pyrimidine metabolism
pgs01100
Metabolic pathways
pgs01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CPT03_22505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgs02044
]
CPT03_22505
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
CPT03_22505
Secretion system [BR:
pgs02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
CPT03_22505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
SNAD4
PCSK9_C3
APOBEC2
NAD1
XOO_2897-deam
Motif
Other DBs
NCBI-ProteinID:
ATP59358
UniProt:
A0A2D1UCK6
LinkDB
All DBs
Position
5294522..5294944
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AA seq
140 aa
AA seq
DB search
MNLATDLSHRSHCVRAHVGAVLTKDTRIISIGYNGPPSGTHNCDEEWPETGCDRDSRGSC
SLALHAEENAILYAVKNGSKISGSTLYTTLSPCIACARLILSSGIKLVYYKDSYAEYKGL
SSDEGVDFLRRFGVEVIKYS
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggctaccgatttgtcgcatcgctcacactgtgtgcgtgcccatgtaggtgct
gtattaacaaaagatacaaggattatctccattggttataatggtccgccttcaggtacc
cataactgtgatgaagaatggccggaaactggatgcgacagagattctcgtggcagttgt
tctcttgcattacatgcagaagagaatgctatattgtatgcagtaaaaaatgggtctaaa
atatcggggtcaactttgtataccaccttgtcgccatgcattgcttgtgccaggttaata
ttatcgtcaggtattaaattagtttactataaagattcctatgcagagtataagggcttg
tcaagcgatgaaggtgttgattttctgcgaagatttggtgtggaggtaattaaatattct
taa
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