Porphyromonas gingivalis TDC60: PGTDC60_0010
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Entry
PGTDC60_0010 CDS
T01516
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pgt
Porphyromonas gingivalis TDC60
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pgt03110
]
PGTDC60_0010 (clpC)
Chaperones and folding catalysts [BR:
pgt03110
]
Heat shock proteins
HSP100
PGTDC60_0010 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
Clp_N
TniB
AAA_7
AAA_18
bpMoxR
AAA_3
IstB_IS21
Torsin
ResIII
UVR
RNA_helicase
ATPase_2
NACHT
RsgA_GTPase
RuvB_N
Mg_chelatase
AAA_24
DUF815
SRP54
DUF87
DUF7432
AAA_19
T2SSE
CLP1_P
DNA_pol3_delta2
NBD_SMAX1
GntR
NBD94
Motif
Other DBs
NCBI-ProteinID:
BAK24181
LinkDB
All DBs
Position
7402..9981
Genome browser
AA seq
859 aa
AA seq
DB search
MAYDFTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELK
RLIELEAIAESLPASPEGSPIFTPSAREAINDATDICADMEDEAVSPVHLLLSILNSTQE
SLVQKIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILDGYQDNDFDDEEDESSPPSGN
GGAGRGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIE
RVIQILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAG
TKYRGQFEERLKAVLDELKKNPQIIFFIDEIHTIVGAGSAAGSMDTANMLKPALARGQIQ
CIGATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTILQNIKEKYEDYHGVRYTDEA
IKAAVELTDRYVSDRFFPDKAIDAMDEAGASVHITNVVAPKEIEILEAELTSVRENKLSA
VKAQNYELAASFRDQERRTQQQIAEEKKKWEDQMSKHRETVDENVVAHVVALMTGVPAER
LSTGEGERLRTMADDLKTKVVGQDTAIEKMVRAIQRNRLGLRNEKKPIGSFLFLGPTGVG
KTYLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTERVRRKP
YSVVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQ
GIGFHSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELK
SVLARIHRAGYDLVLTDEAKDVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEK
GQTLTLSARDGEIIVQEQA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgactttacacaaacattccgcaacagcctggagtacagctatcaggaagca
acccgtctcggcgtcgtagccgtgacgcaggatatgctcgtactcggtatcattcgcgac
ggagacaatggcgcgatcgacatcatgcggcactatgggatcaacttgtacgaactcaaa
cggttgatcgagttggaagccatcgccgagagtttgcctgcttcgcctgagggatcgccc
atcttcaccccttcggctcgggaggctatcaatgatgccacagacatctgtgccgacatg
gaggacgaggccgtcagcccggtccatctgttgctgagtatcctcaactcgacacaggag
agcttagtacaaaagatatttatgaaacaaggtataaaatacgacaccatcctgtcggat
tacttcggacagcgcaacccctccgaagggaagtctccctccgaaatggagatcctcgac
gggtaccaagacaacgacttcgacgacgaagaggacgaatcctctccgccttccgggaat
ggcggggcaggcagaggctccggcgacgcccccgaacagaataccggcggaggcgatact
accaccacgacacggagtggaggcgacacgcctgcactggacaccttcggcaccgacatc
accgccatggcagcagcaggcaagctcgacccggtagtgggtcgggagcaggagatcgaa
agggtgatacagatactcagccggcgcaaaaagaacaatccggtgctcatcggcgaaccc
ggtgtgggcaagagtgccatcgtggaaggactggccgaacgcatcgtgaacaggaaggtg
agccgtattcttttcgacaagcggatcatcagcctcgatttggctcagatggtagccggc
accaaatatcgcggacagttcgaagagcggttgaaagccgtgctcgatgagctgaagaag
aatccgcagatcatcttcttcatcgacgagatacataccatcgtgggagcaggctctgca
gccggatcgatggatacggccaatatgctcaaacccgctcttgcccgtggacagatacag
tgcatcggagccactacgctggatgagtatcgtaagaacatagaaaaggacggagcactc
gaacgccgcttccagaaggtgccgatagccccctcgactgcagaagaaacgctgaccatc
ctgcaaaacatcaaagagaaatacgaggactatcacggtgtacgctatacggacgaagcg
atcaaagcggcagtggaactgaccgatcgctatgtatccgatcgtttcttcccagataag
gcgatagatgccatggacgaggccggcgcgagcgtccatatcaccaatgtggtggctccg
aaagaaattgagatactggaggccgaattgacatcggtgcgagagaacaagctctcggcc
gtaaaggctcagaactacgaactggctgcctccttccgcgatcaagagcggcgcactcag
cagcagatagcggaagagaagaaaaaatgggaagatcagatgtccaagcaccgcgagacg
gtggacgagaatgtagtggcgcacgtagtggcgttgatgacaggcgttccggctgagcgg
ctgagcacgggcgaaggcgaacgtctgcgcacgatggcagatgatctcaagaccaaagta
gtaggtcaggacacagccatcgaaaagatggtgcgtgccatccagcgcaatcgtctggga
cttcgcaatgaaaagaaaccgatcggctctttccttttcctcggccccacgggggtaggc
aagacctatttggccaagaagctcgccgaatacctgttcgaggatgagaatgccatgatc
agggtggatatgagcgagtatatggagaagttctccgtatcgcgtctcgtgggtgcccct
ccgggatatgtgggctatgaagaaggcggccaactgacggagcgcgtaagacgcaaaccc
tattccgtggttctcttggatgagatcgaaaaggcgcatgccgatgtcttcaatctgctc
ttacaggtgatggacgaaggtcagctgaccgatagtctgggacggcgcgtgaatttcaag
aacaccgtgatcatcatcacctccaacgtgggtacacgccagctcaaagacttcgggcag
ggtatcgggtttcattcggaaaaagacgaggaagcgaacaaggagcatagccgttccgtg
atccaaaaagccctgaacaagacgttcagccccgaatttctcaaccgtttggacgacatc
atcctcttcgaccaactgggcaagacggagattcgccggatggtggacatagagcttaaa
tccgtcttggcgcgcatccatcgtgccggatacgacctcgtccttaccgatgaagccaag
gatgtgatagcgacgaagggatacgacctccaatacggagcacgaccgctcaagcgcaca
ctccagaacgaagtggaggatcgcctcacggatcttatcctctccggacagatcgagaaa
gggcagacgcttacgctctctgctcgcgatggcgagatcatcgtacaagaacaagcataa
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