Porphyromonas gingivalis TDC60: PGTDC60_0051
Help
Entry
PGTDC60_0051 CDS
T01516
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00300
Lysine biosynthesis
pgt00470
D-Amino acid metabolism
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
pgt01120
Microbial metabolism in diverse environments
pgt01230
Biosynthesis of amino acids
Module
pgt_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PGTDC60_0051 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGTDC60_0051 (lysA)
Enzymes [BR:
pgt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PGTDC60_0051 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FBPase_glpX
Motif
Other DBs
NCBI-ProteinID:
BAK24221
LinkDB
All DBs
Position
60349..61497
Genome browser
AA seq
382 aa
AA seq
DB search
MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTIAAAGFGADCVSGG
EIEAAIEAGFPASDIFFAGVGKSDEEILLALEARIGAFVVESVPELLNIERLAGSKNDIA
PILLRLNPEVDAHTHSHITTGLAENKFGLLPEDALALMPHLLQSGSLVWRGLHFHIGSQI
RSAKVFEELCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRR
MIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQ
IRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAY
GAVMASSYNMRPLPGSLFSDEQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacctttctatttttatgatctgacactcttggagaggacgctttccgcgctc
gcccggagtgcaggaaggcacgatgttgccattcactatgcgctcaaggcgaacaatcat
cctcgtattttgcagacgattgccgctgccggcttcggggcggactgtgtgagtggaggg
gagatcgaagcggctatcgaggcaggctttcccgcttccgatattttttttgccggagta
ggcaaaagcgatgaagagattttgcttgctttagaggcgcggataggtgctttcgtagta
gagagtgtgcccgagttgctgaacatcgaacgattggccggatcgaagaacgacatcgct
ccgatattgcttcggctcaatccggaggtcgatgcgcatacgcacagccatataacgaca
ggattggcagaaaacaaattcggtcttttgcccgaagatgcacttgcactgatgccccac
cttttacagtccggatcgctggtatggagaggattgcacttccatattggatcgcagata
cggtcagccaaggtttttgaggagctatgcgaaaagaccaatcgcatccttgcttctttc
cgtacggccggctattcccctgacattatagatatgggaggcgggcttggtatcaattat
gacgagccggaggccgaaccgatacctgattttgccacttatatcgagcggtatcgacgg
atgatagagaccggtgaggctcggctgcatatcgaacccgggcgttcggtggtggcacaa
tgcggcagtctgattactcaagtgctgtacatcaaagaaggaaaggcaaaaaagtttgcc
atagtggatgccggtatgaccgacctcgtccgtccggctttgtatgaggcgcatcaccaa
atccggttggtgcaacccggagaatggacgatgcgtgcgacttctccttcagcggctctg
acagagaaatacgatgttgtcggtcctatctgcgaatccagcgatgtattcgagcgtgaa
ttgctcatgcccgaactcaaacgcggcgattatctggctattcgttcggccggagcatat
ggagccgtgatggcttcttcctataatatgcgtccgctaccgggaagtcttttctcagat
gagcaataa
DBGET
integrated database retrieval system