Porphyromonas gingivalis TDC60: PGTDC60_0502
Help
Entry
PGTDC60_0502 CDS
T01516
Name
(GenBank) putative DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt03030
DNA replication
pgt03430
Mismatch repair
pgt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGTDC60_0502
03430 Mismatch repair
PGTDC60_0502
03440 Homologous recombination
PGTDC60_0502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgt03032
]
PGTDC60_0502
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_0502
Enzymes [BR:
pgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGTDC60_0502
DNA replication proteins [BR:
pgt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGTDC60_0502
DNA repair and recombination proteins [BR:
pgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGTDC60_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAK24671
LinkDB
All DBs
Position
complement(533860..534351)
Genome browser
AA seq
163 aa
AA seq
DB search
MLDFAAIDFETANAERTSVCSVGIIVVRGGEIVHRYYSLIRPEPDYYNYHNTRVHGLTAA
DTESARIFPDVWAEVEPLIAGLPLVAHNKPFDEGCLKAVFRMYRMDYPDYPFFCTLQAAR
RQLRHLSDHRLPTVAQCCGYILAQHHQALADAEACAAIALKLL
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgctggactttgctgccatagatttcgagacggccaatgccgagcggacgagcgtctgc
agcgtgggcatcatcgttgtacgaggtggcgagatcgtacaccgttattacagcctgatt
cgccccgaaccggactattacaattaccacaatacacgcgtacacggactgaccgctgcc
gacaccgagtcggcacggatctttccggacgtgtgggccgaagtggagcctctgatcgca
gggcttccgctcgtggcacacaacaagccgttcgacgaaggctgcctcaaagcggtattc
aggatgtaccgaatggactaccccgactacccgttcttctgcacgctccaggcagcacgc
cgccaactgcgacacctcagcgatcatcgtctgcccaccgtagcccaatgctgcggatat
atattggcacaacaccaccaagccctggcagatgcagaagcctgtgccgccatcgccctg
aagctcttgtag
DBGET
integrated database retrieval system
