Porphyromonas gingivalis TDC60: PGTDC60_0685
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Entry
PGTDC60_0685 CDS
T01516
Symbol
frdB
Name
(GenBank) succinate dehydrogenase/fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00020
Citrate cycle (TCA cycle)
pgt00190
Oxidative phosphorylation
pgt00650
Butanoate metabolism
pgt00720
Other carbon fixation pathways
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
pgt01120
Microbial metabolism in diverse environments
pgt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PGTDC60_0685 (frdB)
00650 Butanoate metabolism
PGTDC60_0685 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PGTDC60_0685 (frdB)
00720 Other carbon fixation pathways
PGTDC60_0685 (frdB)
Enzymes [BR:
pgt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PGTDC60_0685 (frdB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4_9
Fer4_17
Fer4_10
Fer2
Fer4_6
Fer4_2
Fer4
Fer4_21
Fer4_22
Fer4_4
Fer4_3
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
BAK24851
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All DBs
Position
722815..723570
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AA seq
251 aa
AA seq
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MDKNINISVKVWRQKGPKEKGHFETYQLQNISQSASFLEMMDILNEQLIKEHKAPVVFDH
DCREGICGMCSLYINGHPHGPDDSITTCQLHMRRFDDGDTITIEPWRSAGFPVIRDLMVD
RSAYDKIIQSGGFVSVNTGGIPDANAIPISKKNADEAMDAAACIGCGACAAACKNGSAML
FVSAKVSQLALLPQGRIEAARRAKAMVAKMDELGFGNCTNTRACEMECPKNVSISHIARL
NREYIVAKNRD
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggataagaatatcaatatatcggttaaggtttggcgtcagaagggaccgaaggaaaaa
ggacacttcgagacgtatcaattgcaaaacatttcgcaaagtgcctctttcctcgaaatg
atggatatcctgaacgagcagttgatcaaggagcataaagctccggtggtgtttgaccac
gactgtcgcgaaggtatttgcggtatgtgctcactctacatcaacggtcatccccacggg
ccggacgatagcatcaccacttgtcagctgcacatgcgtcgtttcgatgatggtgatacg
atcacgatagagccttggcgctcggccggcttccctgtgatcagagacctcatggtggat
cgctcggcttatgacaagatcattcagtccggcggattcgtttccgtcaatacggggggt
atccccgatgccaacgctatccccatttccaagaagaatgcggatgaggccatggatgca
gcggcttgtatcggctgtggagcttgtgcggcagcatgcaagaacggttcggctatgctc
ttcgtatcggccaaggtgagccagttggctcttcttccgcagggacgtatcgaggctgcg
cgccgtgccaaagctatggtggccaagatggatgaactcggattcgggaactgtacgaat
acacgtgcatgtgaaatggaatgcccgaagaacgtatcgatcagccacattgctcgtctg
aacagggagtacatcgtcgctaagaatcgtgactga
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