Porphyromonas gingivalis TDC60: PGTDC60_0736
Help
Entry
PGTDC60_0736 CDS
T01516
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00521
Streptomycin biosynthesis
pgt00523
Polyketide sugar unit biosynthesis
pgt00541
Biosynthesis of various nucleotide sugars
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
pgt01250
Biosynthesis of nucleotide sugars
Module
pgt_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PGTDC60_0736 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PGTDC60_0736 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PGTDC60_0736 (rfbC)
Enzymes [BR:
pgt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PGTDC60_0736 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAK24900
LinkDB
All DBs
Position
778693..779283
Genome browser
AA seq
196 aa
AA seq
DB search
MNFIPTEIPEVVILEPRLFRDDRGYFFESFSRQEIETGIRPINFVQDNESASRYGVLRGL
HFQKPPHAQSKLVRVVRGCVIDYAVDIRFGSPTFGKYVAVELSDTNFRQLFIPRGFAHGF
VVLSDEVVFQYKCDNYYAPQSEGAIAWNDSNLDIDWKIPAEDIILSAKDQANPSWTELIS
SEDFRNLFPYNQDLYE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatccccaccgaaatacccgaagtcgttatccttgagccgcgattgttccgt
gacgatcgaggctatttcttcgaatcattcagtcgccaagagatagaaacgggtattcgc
cccattaattttgtacaagacaacgaatcggcatcccgatatggtgtactaagagggctt
cacttccagaaacctccacatgctcagagcaagctggtgcgagtagtacgtgggtgtgtg
attgactatgccgtggatattcgcttcggatcgcctactttcggcaaatatgtagcagtg
gagctttccgatacgaacttcagacagttgtttatcccgcgcggattcgctcacggtttt
gtcgtgctaagtgacgaagtcgtatttcagtacaaatgcgacaactactatgctccacaa
agcgaaggagccattgcctggaatgattcgaacttagatattgactggaaaatccctgca
gaggacattatcctctcagctaaagatcaggccaatccgtcatggacggaattgatatcg
agcgaggatttccggaatctcttcccctacaatcaagacttatacgaatga
DBGET
integrated database retrieval system
