Porphyromonas gingivalis TDC60: PGTDC60_0738
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Entry
PGTDC60_0738 CDS
T01516
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00521
Streptomycin biosynthesis
pgt00523
Polyketide sugar unit biosynthesis
pgt00525
Acarbose and validamycin biosynthesis
pgt00541
Biosynthesis of various nucleotide sugars
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
pgt01250
Biosynthesis of nucleotide sugars
Module
pgt_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PGTDC60_0738 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PGTDC60_0738 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PGTDC60_0738 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PGTDC60_0738 (rfbB)
00525 Acarbose and validamycin biosynthesis
PGTDC60_0738 (rfbB)
Enzymes [BR:
pgt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PGTDC60_0738 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
BAK24902
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All DBs
Position
780144..781208
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AA seq
354 aa
AA seq
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MNFRRHILITGGAGFIGSHVVRLMVNGYPDYEIINLDTLTYAGNLANLKDIESKPNYRFV
KADICNANTLKKVFAHYAIDGVIHLAAESHVDRSIKDPLAFARTNVMGTLTLLQTAKEAW
HGEYEGKRFYHISTDEVYGALAFDGTLFTEETKYDPHSPYSASKASSDHFVRAYHDTFGL
PTVISNCSNNYGPYQFPEKLIPLFINNIRHNKPLPVYGKGENVRDWLYVEDHARAIDLIF
HRGKNGDTYNIGGFNEWKNIDLIKVMIRVVDRLLGREEGSSEKLITYVADRAGHDLRYAI
DSTKLKNELGWEPSLQFEEGIEKTVRWYLHNQDWLDRVTSGDYLRYYDEMYSER
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccgacgtcatattctcatcaccggcggtgccggttttatcggatcgcatgtg
gtacgactcatggtcaatggttatcctgattatgagatcatcaatctcgatacgctgaca
tatgccggcaatctggccaatctcaaggatatagagtccaagccgaactatcgtttcgta
aaggcggatatttgcaatgccaatacgctgaagaaagtctttgctcattatgccatcgac
ggagtcattcatctggcggccgaaagtcatgtggatcggtctataaaagatcctttagct
tttgcccgcaccaacgtaatggggacgctgacgctcctgcaaacggccaaagaggcttgg
catggggaatacgaaggcaagcgtttctaccacatatcgaccgatgaggtatatggagca
ttggctttcgacggtacgctatttacggaagaaaccaaatacgacccacattctccctat
tcggccagcaaggcttccagcgaccattttgtccgggcttatcacgatactttcggtctg
ccgacagtgatctccaactgctcgaacaactatgggccctatcaattcccggagaaactc
attcctctattcattaacaatatccggcacaataagcctctacccgtctatgggaaaggg
gagaacgtccgtgactggctctatgtcgaagaccatgctcgtgccatcgatctgatattc
catcggggcaagaatggcgatacctataatatcggtggctttaacgaatggaagaacatc
gatctcatcaaggtgatgatccgcgtggtggatcgtcttttgggcagagaggaaggctct
tcggagaagctgatcacctatgtggcagacagagccggacacgatctgcgctatgccatc
gactcgactaagctgaaaaacgaactgggctgggaaccctctctccaattcgaagaaggc
atcgagaaaaccgtccgctggtatcttcacaatcaagactggctggatcgggtgaccagc
ggcgactacctccgatactacgacgagatgtactccgaacgatag
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