Porphyromonas gingivalis TDC60: PGTDC60_1117
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Entry
PGTDC60_1117 CDS
T01516
Name
(GenBank) DHH subfamily 1 protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00920
Sulfur metabolism
pgt01100
Metabolic pathways
pgt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
PGTDC60_1117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_1117
Enzymes [BR:
pgt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
PGTDC60_1117
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
PGTDC60_1117
DNA repair and recombination proteins [BR:
pgt03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
PGTDC60_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAK25274
LinkDB
All DBs
Position
complement(1160350..1161393)
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AA seq
347 aa
AA seq
DB search
MAGIKIDPAPATALHKMVEEAERIALISHTAPDGDSVGSSIGFAAMLREKGKSHISVIVP
DDIPQYLYCIPGANKVIVHETHPSEAEKALAEADLIFCMDFNAPHRVAGLQSALESSSAP
KVLIDHHLYPADIFALSFSYPPLSSTSELVLRLAKAIGMESCLTQDAATALMTGILTDTG
VFSYSSSDPDLYLLVADLMRAGADKDTIIRNTFQQNSEGKMRMQGYVLYEKMTLLPEMGV
AYFTLSAEELVRFHNRTGDTDGLPNLPLDIAGIEAVCFLREDKNQIKLSFRSTGNYPVNT
LAENFGGGGHKNAAGGEFQGSLQEATEKLLKIWKDFNPKNYDNKNQQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataaaaatcgatccggctccggcaacagctttgcataaaatggtagaggag
gcagagcgcatcgctctgatctcgcatacggctccggacggcgactcggtaggaagcagt
atcggttttgctgccatgctgagagaaaaaggcaagtcccacatcagtgtaatcgtacct
gatgatattccccaatacctatactgcattccgggagcaaacaaagtaatagtgcacgag
actcatccttcggaggcggagaaggcattggctgaagccgatctgatcttctgcatggat
ttcaatgctccacatcgggtagcaggactgcaaagcgcattggagagttcgtcagccccc
aaagtgcttatcgatcatcatctctatccggcagatatcttcgctctcagcttcagctac
ccccccctgtcttctacttcggagttggtcttgcgtttggccaaggccataggcatggag
tcctgcctgacccaagatgcggccacggctttgatgacagggatactgacggatacgggc
gtattttcctacagctcttccgatccggatctttatctgctcgtagcagatcttatgcga
gccggtgcggacaaagacacgatcatccgcaatacctttcagcaaaattcggaaggcaag
atgaggatgcagggttatgtgctgtacgagaaaatgactttgctgccggaaatgggcgta
gcatacttcacgctgtcagcagaggagctggtacgattccacaaccggacgggtgatacc
gatggtctgcccaatctgcccctcgatattgcagggatagaggctgtatgtttcctgcga
gaggacaaaaatcagatcaagctctcattccgctccacaggcaactatccggtgaacacc
cttgccgagaacttcggtggcggcggacacaagaatgctgccggcggcgagttccaaggc
agtctgcaagaagctacagagaagctgctgaagatttggaaagacttcaaccccaagaat
tacgataataagaaccaacaataa
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