Porphyromonas gingivalis TDC60: PGTDC60_1197
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Entry
PGTDC60_1197 CDS
T01516
Name
(GenBank) probable exported transglycosylase protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pgt
Porphyromonas gingivalis TDC60
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgt01011
]
PGTDC60_1197
Enzymes [BR:
pgt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PGTDC60_1197
Peptidoglycan biosynthesis and degradation proteins [BR:
pgt01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PGTDC60_1197
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
BAK25352
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All DBs
Position
1233619..1235037
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AA seq
472 aa
AA seq
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MVGLAASILVGALSQSCRGCVSEEGRADSIPCDSSVVSGLRSADTLRVATLSSSTTYFVY
KDEEMGYEYELAKLLADSLGLTLVVEVVPNDEAFYAAVDTGLVDMAITPQAATFKGKQKY
LFVGPEEISGQVLVQRSDGNPRITNVTDLIGKPVTVMAHTRYADRLRHLNEEVGGGIDSL
ILSGDTLTTEDLITQVAKGEIDYTFADEQLARLAQTYYRNIDISLKVGFGQRLQWIVRKD
NHCLARWVNRWGESIPDKESYRAIQKRYFEMSKSDDEVEEEQSAPRPRIKQRKGSISQYD
TIFKHYAEEFRLGWSWHLLASIAYHESRFNAGIVGWSGARGLMGIMPRTGRRFGADKQEL
LDPEVSVRVSIRCLLAFKNEFPDVTDPEEKLKFTLAAYNAGSGHVADARRLAAKYGGNPN
VWDNNVEAYIRLKKDPNYYNDPVCRSGYLRGAETINYVRSVMARCQAYKQKD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtcttgccgcttccatccttgtaggagccttgtcgcagagttgccgaggctgt
gtgtccgaagaggggagagccgacagcatcccatgcgactcctctgtcgtatcggggctg
cgctctgcggacacgctacgcgtggctacactctcatcatcgaccacctacttcgtgtac
aaagacgaagaaatgggctatgagtacgagctggccaagctgctcgccgactctctgggc
ttgactctggtcgttgaagtggtgcccaacgacgaggcattttatgctgcggtcgatacc
ggtctggtcgatatggcaattacacctcaggccgcaaccttcaagggtaagcagaagtat
ctcttcgttggtcccgaagaaatatcgggacaagtattggtgcaacgcagcgacggcaat
ccacgtataacgaacgtaacagatcttatcggcaagcccgttacagtcatggcacatact
cgctatgccgatcggctccggcacctgaacgaagaagtggggggaggtatcgattcgctg
atcctcagcggagataccctcacgaccgaagacctgatcacgcaggtagccaaaggagaa
atagactacacctttgccgatgaacagttggcacgactggcacaaacctactaccgcaat
atagacatcagtttgaaagtaggcttcggacaaaggttgcaatggatcgtccgcaaggac
aatcattgtctggcgcggtgggtgaaccgatggggggaatccatccccgacaaggaatcg
taccgagccatacagaagcgatacttcgagatgagcaagagcgacgatgaggtcgaagag
gagcagtccgctccccgacctcgcatcaagcagaggaaagggagtatatcgcagtacgat
accattttcaagcactatgccgaggagtttcggctcggctggtcctggcatctgctcgca
tccatcgcctaccacgaatcgcgcttcaatgccggtatcgtaggctggtccggtgccaga
ggtttgatgggtatcatgccgaggacaggccggcgcttcggggccgacaagcaggaactt
ctggatccggaagtttcggtacgcgtctccatccgatgcctgttggcgttcaagaacgaa
tttcccgatgtaacggatccggaagaaaagctcaagtttacgctcgctgcctacaatgcc
ggctcgggtcacgtggcggacgcaaggcgtttggctgcaaagtacgggggcaaccccaac
gtatgggacaataacgtggaggcatacatccgcctcaagaaagaccctaactactataac
gatcctgtctgtcgctccggctatctgcgaggtgcggagacgatcaactatgtacgcagc
gtaatggctcgttgtcaggcatacaaacagaaggattga
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