Porphyromonas gingivalis TDC60: PGTDC60_1310
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Entry
PGTDC60_1310 CDS
T01516
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00730
Thiamine metabolism
pgt01100
Metabolic pathways
pgt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PGTDC60_1310 (thiC)
Enzymes [BR:
pgt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PGTDC60_1310 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAK25464
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Position
1347065..1348828
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AA seq
587 aa
AA seq
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MKEFKVTTGPLPGSEKIYVEGERFPFLRVPMRRIRMSDTILENGEREKNEDVVVYDTSGP
YTDTSYEVNLHQGVPKIREQWIEDRGDTVRLEGLSSEYGRMRQSDASLEELRYEHVCTRP
RAAKDGCATQLYYARQGIVTPEMEFVAIRENQLIDQVRTRYRAEEGEPLGAVIPRKITPE
FVRDEIAAGRAILPANINHPESEPMIIGRNFLVKINANIGNSPISSTIEEEVEKAVWSIR
WGADTVMDLSTGDHIHETREWIIRNSPVPIGTVPLYQTLEKVQGDVTKLNWEIFRDTLIE
QAEQGVDYFTIHAGLRWHHVPLTLRRLTGIVSRGGSIIANWCTTHKRESFIYEHFEEICQ
ILARYDVAISLGDGLRPGCIHDANDAAQIAELKTLGELTEIAWKYNVQTIIEGPGHVPMH
KIRENMEIQLEACHGAPFYTLGPLVSDVASGYDHITSAIGAAQIGWFGTAMLCYVTQKEH
LGLPNREDVREGVVTYRLAAHAADLAKGHPTAYWRDYMMSKARFEFRWKDQFHLSLDPEK
AIQFHDATLPDEGHKEAHFCSMCGEHFCSMRANKNFRKLLNEEAVSK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattcaaagtgactaccggtcctctgcccggcagtgagaaaatctatgtcgaa
ggagagcgtttccccttcttgcgcgtaccgatgcggcgcatccgaatgtccgacaccata
ttggagaacggcgaacgtgagaaaaacgaagatgtagtcgtatacgataccagtggcccc
tataccgatacctcctatgaggtgaatctgcaccaaggcgtaccgaagatacgcgagcag
tggatagaggatcggggcgatacggtgcggctcgaagggctcagctccgaatacggacgg
atgaggcagtcggacgcttcgctcgaagagctgcgctacgagcatgtgtgcacgcgtccc
cgtgccgccaaggacggctgcgccacgcagctctactacgcccgtcaggggatcgtgacg
ccggagatggagttcgtggccatccgcgaaaatcagttgatcgatcaggtcaggacgcgc
tatcgcgccgaggagggtgagccgctcggagctgttattccgcgcaagatcacgcccgaa
tttgtacgcgacgagattgccgccggacgggctatccttccggccaatatcaatcatccg
gaaagtgagccgatgatcatcgggcgcaatttcctcgtcaagatcaatgcgaacataggc
aattcgcccattagcagtaccatcgaggaagaggtggaaaaggccgtctggtccatacgc
tggggtgccgatacggtcatggatctctccacgggggatcatatccatgagacgcgcgag
tggatcatccgcaattcgcccgtgcccatcggcactgtgcccctctaccagacgctggag
aaggtgcagggcgatgtgacgaagctcaactgggagatattccgcgatacgctcatagag
caggccgagcagggtgtggactacttcaccatccacgccggtctgcgttggcaccacgtg
cctctgaccttgcgccgcctcacggggatcgtctcccgcggtggttccatcatcgctaac
tggtgcaccacccacaagcgcgaaagtttcatctacgagcatttcgaagagatctgccaa
atcctcgcacgctacgacgttgccatatctctcggcgatggcttgcgcccgggctgcatc
cacgacgccaacgatgctgcgcagatagctgagctgaagacactgggcgaacttaccgag
atcgcttggaagtacaacgtgcaaaccattatcgaaggcccgggacacgtgcccatgcac
aagatccgcgagaatatggagattcaactcgaagcctgccatggcgcacccttctacact
ctcggcccgttggtcagcgacgtggcgtccggctacgaccatatcacatcggctatcggc
gcggcacagatcggatggttcggcacagccatgctctgctatgtgacgcaaaaggagcat
ttgggtctgcccaaccgcgaagatgtacgtgaaggtgtagtaacctatagactggctgct
catgccgccgacttggccaaaggacaccccacggcgtactggcgcgactatatgatgagc
aaggcgcggttcgaattccgctggaaggatcagttccatctctcgcttgatccggagaaa
gcgatccaattccacgatgccacgctgccggacgaaggccacaaggaggcgcatttctgc
tccatgtgtggcgaacacttctgctccatgcgtgccaataaaaatttccgcaagttgcta
aacgaagaggcagtctccaaatga
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