Porphyromonas gingivalis TDC60: PGTDC60_1857
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Entry
PGTDC60_1857 CDS
T01516
Name
(GenBank) aminotransferase, class V
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00450
Selenocompound metabolism
pgt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PGTDC60_1857
Enzymes [BR:
pgt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PGTDC60_1857
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PGTDC60_1857
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
BAK26006
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All DBs
Position
1924143..1925357
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AA seq
404 aa
AA seq
DB search
MYDIQKIREDFPILHTRVHGKPLIYLDNAATTQKPIAVLDQIERAYRTFNANIHRGVHHL
SQVATEQHENARKRIARYIGAEDPKEVLFTRGTTEAINLVASSFGQAFVRSGDEIIISTL
EHHSNIVPWQLLAERTGARLRVIRLTESGELDVEHFRSLLNERTKIVSIAHVSNVLGTIN
PIRRITDLAHAAGVPVLVDGAQAIAHCRVDVRELGADFYAFSGHKVYAPTGIGVLYGKAE
WLEKIPPYHGGGEMIAKVTFEKTTYNELPYKFEAGTPDYVGSTALATALDYIEGLGLEAI
AAHEDKLLRMATEGVRAFPNARIIGEAEHKSGVLSFLIGDIHPYDLGMLLDRLGIAIRTG
HHCAEPLLESMGLNATARASFALYNTEEEVEQFLQALKRVVSMF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacattcaaaaaatcagggaagacttccccatcctccatacccgggtacacggt
aaacctctcatctatctggacaatgccgccacgacacagaaacccatagcggtattagac
caaatcgaacgagcctaccgcacattcaatgccaatatccaccgcggcgtacaccatctg
agtcaggtggctacggagcagcacgaaaatgctcgcaagcggatagcccgctacatcgga
gcggaagaccccaaagaagtgctctttacgcgcggcaccacagaggcaatcaatctggtg
gcctcttcgttcggccaagctttcgtccgctccggcgatgagattatcatcagtaccctc
gaacaccattcgaatatcgtcccatggcaacttttggccgaacgtaccggtgctcggctc
agagtgatccggttgaccgaatcgggcgaactggatgtggagcatttccggtctctactg
aacgaacgtaccaaaatcgtttcgatagcccacgtcagcaatgtgctcggcaccatcaat
cccatacgccggataacggatttggctcatgccgccggagtacccgttctggtcgatgga
gcacaggccatcgcccactgccgggtagatgttcgggagttgggagcggatttctacgcc
ttctccggccataaagtctacgcacccacaggaataggcgtattgtatggcaaagcggag
tggttggagaagatccccccctaccacggtggcggagagatgatcgccaaggtgacattc
gaaaagaccacctacaacgaattgccctataagttcgaagccggcacgccggactatgtc
ggctccacggctttggccacagctctcgactacatcgaaggattgggtttggaagccata
gccgcacatgaagacaaactcctgcgcatggccaccgaaggcgtgagagctttccccaat
gcccgtatcatcggagaagccgaacacaagagcggtgtgctctctttccttataggggac
attcatccctatgacctcggcatgctgctcgatcggctgggtatagccatccgtaccgga
catcactgtgccgaaccgctactcgaaagcatgggactcaatgccacggctcgcgcctcc
tttgctctctacaataccgaggaggaagtggagcaattcctccaagccttgaaacgtgta
gtaagcatgttctaa
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