Porphyromonas gingivalis TDC60: PGTDC60_1873
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Entry
PGTDC60_1873 CDS
T01516
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pgt
Porphyromonas gingivalis TDC60
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgt03016
]
PGTDC60_1873 (truA)
Enzymes [BR:
pgt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PGTDC60_1873 (truA)
Transfer RNA biogenesis [BR:
pgt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PGTDC60_1873 (truA)
Prokaryotic type
PGTDC60_1873 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAK26022
LinkDB
All DBs
Position
1941265..1942023
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AA seq
252 aa
AA seq
DB search
MARFFIYLAYNGTRYSGWQTQPNAPSVQQTVEEAISTIVRQPVGVVGAGRTDAGVHAHEM
VAHADLPCDTPAEAATLTERLNKLLPRDIVIYRMAPVKADAHARFDAISRTYHYYLTEQK
DPFMEGLMLKTYRKLDFERMNEAAALLPRYIDFTSFSKLHTDVKTNNCRITEARWMPLAQ
TGQWVFSITADRFLRNMVRAIVGTLFHVGTGKLSITDFRDIIESQDRSRAGSSAPAHALY
LERVVYPSDLFL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcttcttcatctatctggcatacaacggtactcgctacagcggctggcaaacg
cagcctaatgctcccagtgtgcagcagaccgtagaggaagccatatctaccatcgtgcgc
caacctgtcggggtcgtcggagcaggacgaaccgatgcaggagttcatgcccacgagatg
gtagcacatgccgatcttccctgcgatacgccggcggaagctgccaccctgacagaaagg
ctcaataaactcctcccacgcgacatcgtcatataccgaatggctcctgtaaaagccgat
gcccacgcgcgcttcgatgccatctcccgaacttaccactactatctgaccgagcagaaa
gatccttttatggaaggcttgatgctgaagacctatcgtaagctcgacttcgaacgtatg
aatgaagcggcggctcttcttccccgatatatcgacttcacgagcttcagcaaactgcat
actgacgtcaaaacgaacaactgccgtataacggaagcccgatggatgccacttgcacag
accggccaatgggtcttttccatcacggcggacagattcctgcgcaatatggtacgtgcc
atagtcggcacgctcttccatgtggggacgggcaagctatccatcacagactttcgggac
atcatcgaatcgcaggatcgcagccgtgccggctcttcggctccggctcatgccctctat
ctggagagggtagtctacccgtcggatctgtttctctga
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