Porphyromonas gingivalis TDC60: PGTDC60_2030
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Entry
PGTDC60_2030 CDS
T01516
Name
(GenBank) hydrolase
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PGTDC60_2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_2030
Enzymes [BR:
pgt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PGTDC60_2030
DNA repair and recombination proteins [BR:
pgt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PGTDC60_2030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
PUMA_CC
KH_PARP14_4
RNase_3_N
EAD2
Ada3
Motif
Other DBs
NCBI-ProteinID:
BAK26172
LinkDB
All DBs
Position
complement(2104585..2104779)
Genome browser
AA seq
64 aa
AA seq
DB search
MSENKTYTEAMRRLEEIVRVIEHESPDVDELTKLAEEAIALIGFCREKLTVADKQIEELM
AKLS
NT seq
195 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaataagacttatacggaggccatgagacgcctcgaagaaatcgttcgtgtc
atcgaacatgaaagcccggatgtggacgagctgaccaagctggccgaagaggctattgct
ctgattggtttctgtcgtgagaaactgacagtagccgacaagcagatcgaagaactcatg
gccaaactctcatga
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