Porphyromonas gingivalis TDC60: PGTDC60_2039
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Entry
PGTDC60_2039 CDS
T01516
Name
(GenBank) probable peptidylarginine deiminase
KO
K10536
agmatine deiminase [EC:
3.5.3.12
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00330
Arginine and proline metabolism
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PGTDC60_2039
Enzymes [BR:
pgt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.3 In linear amidines
3.5.3.12 agmatine deiminase
PGTDC60_2039
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GFIT
Motif
Pfam:
PAD_porph
Por_Secre_tail
CBM_56
DUF5717
Motif
Other DBs
NCBI-ProteinID:
BAK26181
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Position
2112919..2114589
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AA seq
556 aa
AA seq
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MKKLLQAKALILALGLFQLPAIAQTQMQADRTNGQFATEEMQRAFQETNPPAGPVRAIAE
YERSAAVLVRYPFGIPMELIKELAKNDKVITIVASESQKNTVITQYTQSGVNLSNCDFII
AKTDSYWTRDYTGWFAMYDTNKVGLVDFIYNRPRPNDDEFPKYEAQYLGIEMFGMKLKQT
GGNYMTDGYGSAVQSHIAYTENSSLSQAQVNQKMKDYLGITHHDVVQDPNGEYINHVDCW
GKYLAPNKILIRKVPDNHPQHQALEDMAAYFAAQTCAWGTKYEVYRALATDEQPYTNSLI
LNNRVFVPVNGPASVDNDALNVYKTAMPGYEIIGVKGASGTPWLGTDALHCRTHEVADKG
YLYIKHYPILGEQAGPDYKIEADVVSCANATISPVQCYYRINGSGSFKAADMTMESTGHY
TYSFAGLNKNDKVEYYISAADNSGRKETYPFIGEPDPFKFTCMNETNTCTVTGAAKALRA
WFNAGRSELAVSVSLNIAGTYRIKLYNTAGEEVAAMTKELVAGTSVFSMDVYSQAPGTYV
LVVEGNGIRETMKILK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcttttacaggctaaagccttgattctggcattgggactcttccaactgccc
gcaatcgcccaaacgcaaatgcaagcagaccgaacaaacggtcaatttgcaacagaagag
atgcaacgagcattccaggaaacgaatccccctgcaggtcctgtgcgtgctatcgctgag
tacgaacgctctgcagccgttttggtacgctatccgttcggtatcccgatggaattgatc
aaagagctggccaagaacgacaaggtgattaccattgtggcgagtgaaagccaaaaaaac
accgttataacccagtacacccaaagcggtgtgaatctctctaattgcgatttcatcatt
gcgaaaacggactcttactggacacgcgactataccggttggttcgcaatgtacgatacg
aacaaagtaggtctcgtggactttatttataaccgccctcgtcctaacgatgatgaattc
cccaaatacgaagcacaatatctgggcatcgagatgttcgggatgaagctcaagcagacc
ggtggcaattacatgacggacggatatggatccgctgtgcagtcacatatcgcatatacg
gagaactcctctctgtctcaagctcaagtaaatcaaaagatgaaagactatctcggcatc
acacatcatgatgtggtacaagatccgaacggcgaatatatcaaccatgtggactgttgg
ggcaagtatttggcgccgaacaaaatcctcatcaggaaagtacctgacaatcaccctcag
caccaagctctggaagatatggcagcctacttcgcagcacagacctgcgcatggggaacg
aagtacgaggtgtatcgcgctttggccaccgatgaacaaccgtacacgaactctctgatt
ctgaacaacagggtatttgttcctgtcaatggccccgcctccgtggataacgatgctctg
aacgtctataagacggcaatgcccggttacgaaattataggtgtcaaaggggcttcagga
acaccttggttaggcacagatgccctgcattgtcgtactcacgaggtagcggataagggc
tatctctatatcaagcactacccgatactgggcgaacaggcaggccctgattataagatc
gaagcggatgtcgtctcatgcgccaatgctactatctcgccggtacaatgttactatcgt
atcaatggttccggtagctttaaggctgctgatatgacgatggaatcaacaggtcactat
acttatagctttgcaggtcttaacaagaatgataaggtagaatactatatctctgccgct
gacaatagtggtcgcaaagagacttatccctttatcggcgaacctgatcctttcaagttt
acgtgtatgaacgaaaccaatacatgtactgtgaccggagcagccaaagctcttcgtgca
tggttcaacgccggtcgttcagaactggctgtttcggtaagtttgaatattgccggcaca
tatcggataaagctttataacaccgcaggagaagaagtcgctgcaatgaccaaggaatta
gtagcagggacgagtgtcttcagtatggatgtatattctcaggctccgggcacatatgtt
ttggttgttgaaggaaatggaatccgtgagacaatgaaaattctcaaataa
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