Porphyromonas gingivalis TDC60: PGTDC60_2077
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Entry
PGTDC60_2077 CDS
T01516
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pgt
Porphyromonas gingivalis TDC60
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgt03032
]
PGTDC60_2077 (gyrA)
03400 DNA repair and recombination proteins [BR:
pgt03400
]
PGTDC60_2077 (gyrA)
Enzymes [BR:
pgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PGTDC60_2077 (gyrA)
DNA replication proteins [BR:
pgt03032
]
Prokaryotic type
DNA Topoisomerases
PGTDC60_2077 (gyrA)
DNA repair and recombination proteins [BR:
pgt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PGTDC60_2077 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TBCC_N
Motif
Other DBs
NCBI-ProteinID:
BAK26218
LinkDB
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Position
2153372..2155951
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AA seq
859 aa
AA seq
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MTDREDRIINISIEEEMKTAYIDYSMSVIVSRALPDVRDGFKPVHRRVLYAMNETGNVYT
NPTRKCANAVGEVLGHYHPHGDSSVYMALVRMAQPWSLRYPLVDGQGNFGSVDGDSPAAM
RYTESRLSRIAGEMLQDIDKETVDFQNNFDDTRQEPTVLPTRIPNLLINGASGIAVGMAT
NMPPHNLSEAIDGCVAYIEADGDIDVEGLMQYVKAPDFPTGGFIYGYSGVKEAFETGRGR
VVIRSRAEIEQHNNHERIIITEIPYLVNKAELVSNIAQLINEKRLDGISNISDESNRKGM
RIVVEIKRDANASVVLNKLYKMTALQSSFSVNNIALVKGRPRLLNLKDLIGEFVDHRQEV
VTRRCRFELRKARERAHILEGLLIAVDNIDEVISIIRSSKDAAEAMSRLIERFDLSDIQA
RSIVDMRLRALTGLERDKLRAEFEEIMASINHLEALLADRALLMELVKSELLEIKEKYGD
TRKSEIIYASEEFNPEDFYADDDMIITLSHMGYIKRTPLSEFRTQARGGVGAKGSDTREE
DFVEYIYSASMHATIMLFTAKGRCYWLKVYEIPEGAKNAKGRAIQNLLNIDPDDKVNAFI
RIKNLTTDKEFVNSHYLLFCTRRGIIKKTLLEAFSRPRANGVIAIDLRDNDGLVSVRLTN
GKCDMVIANRGGRAIRFHESVVRPSGRTAMGVKGMTLDDDGEDEVVGMISIKHPEEETIL
VVSEKGYGKRSNIDDYRITNRGGKGVKTLNITEKTGKLVDIRAVTDANDLMIINKSGVAI
RVKVADLSIIGRATQGVKLIDLSKRGDEIASVCSVVSEEEENKAEEHADHTHEVLPQDDS
SSSVENGDVSDMTDAIEPE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgagaagacagaattattaacatcagcatcgaggaggaaatgaagaccgcc
tacatcgactattcgatgtcggtgatcgtctccagagctttgcctgatgttcgcgacgga
ttcaagccggttcatcgccgtgtgctgtatgccatgaacgaaaccggcaatgtgtacacc
aatcccactcgcaaatgcgccaatgctgtcggcgaagtgctgggacactatcacccgcat
ggcgactcttccgtttatatggccttggtgcgtatggcacagccgtggagcctgcgctat
ccgttggtggacggtcagggcaacttcggttcggtggatggcgattcgcctgctgccatg
cgttataccgaatcgcgcctcagccggattgccggtgagatgcttcaggacatagataag
gaaacggtagacttccaaaacaatttcgatgatacacgtcaggagcctacggttctgccg
acacgcattccgaacctcctcataaacggggcttccggtatagctgtcggtatggctacc
aatatgcctccccacaatttgtccgaagctattgacggatgtgtggcgtacatcgaagcg
gatggcgacatagacgtggagggcttgatgcagtatgtcaaggctccggatttccccaca
ggaggattcatatacggctattccggagtgaaggaagccttcgagacgggacgaggccgt
gtcgttatcagaagtcgtgccgagatcgagcagcacaataaccacgagcggatcatcatc
acggagattccctatctggtcaataaggctgagcttgtctccaacattgcacagctgatc
aacgagaagcgtctggatggtatttccaatatatcggacgaatcgaaccgtaagggcatg
cggatcgtcgtagagatcaagcgcgatgccaatgcttcggtcgtgctcaacaagctctac
aagatgacagccttgcaaagctctttcagcgtaaacaatatcgccttggtcaagggacgt
ccccgcctgctcaatctgaaagatctcattggggaatttgtggatcatcgtcaggaggta
gtgacacgccgttgtcgtttcgaattgcgtaaggcacgggagcgtgctcatatcctcgaa
ggcttgcttatagccgtagacaacattgacgaagtaatctctatcatccgttcctccaaa
gatgccgcagaggctatgagtcgcttgatagagcgtttcgatctctcggatattcaggca
cgttccattgtagatatgcgtctacgtgccctgacgggattggaacgcgacaagctgcgt
gcagagttcgaagagatcatggcctccatcaatcatttggaagctcttttggccgataga
gcattactgatggagctggtcaaaagcgaactgctggagataaaagagaaatatggcgat
actcgcaaaagcgagatcatatatgcttcggaagaattcaaccccgaagacttctatgcc
gacgatgatatgatcatcaccctttcgcacatgggctacatcaagcgtacccctctgagc
gaattcagaacgcaggctcgtggcggagtaggagccaagggatcggatactcgcgaagaa
gatttcgtggagtatatctactcggcctccatgcacgccaccattatgctgttcacggcc
aaggggcgttgctattggctgaaggtgtatgaaatccccgaaggtgccaagaatgccaaa
ggacgagctattcagaatctccttaatatcgatcccgacgataaggtcaatgcctttatc
cgtatcaagaacctgacgacggacaaggagtttgtcaatagtcactatctcctcttctgt
accaggagaggaatcatcaagaagacattgctcgaagctttctcccgtccgcgtgccaat
ggtgtgattgctatcgatctgcgagacaacgatggcttggtaagtgtccgattgaccaat
ggtaaatgcgacatggttattgccaatcgcggtggacgtgccattcgtttccatgaatcc
gtggttcgtccttcgggtcgtacagccatgggagtaaagggaatgacgctcgacgatgat
ggtgaggacgaagtagtaggaatgatctctatcaagcatccggaagaagagaccattctg
gtagtaagtgaaaagggatacggcaagcgttcgaatatagacgactatcgtattaccaat
cgcggtggtaaaggggtgaagacactgaatatcaccgaaaagaccggaaagctggtcgat
attcgagccgttaccgatgccaacgaccttatgatcatcaataagagcggtgtcgccatc
cgggtaaaagtggctgatctgagcattatcggtcgagctacacaaggtgttaagctcatt
gatttgtccaagcgtggtgacgagatcgcttccgtttgtagtgtagtctccgaggaagaa
gaaaacaaggcagaagagcatgccgatcatactcacgaagttttgccacaagacgactct
tcctcatctgtagaaaatggtgatgtcagtgatatgactgatgctatcgaaccagaataa
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