Meyerozyma guilliermondii: PGUG_02025
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Entry
PGUG_02025 CDS
T01150
Name
(RefSeq) similar to potential spliceosomal RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pgu
Meyerozyma guilliermondii
Pathway
pgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGUG_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgu03041
]
PGUG_02025
03009 Ribosome biogenesis [BR:
pgu03009
]
PGUG_02025
Enzymes [BR:
pgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PGUG_02025
Spliceosome [BR:
pgu03041
]
Complex A
U2 snRNP components
U2 related factors
PGUG_02025
Complex B
PGUG_02025
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PGUG_02025
Ribosome biogenesis [BR:
pgu03009
]
Eukaryotic type
90S particles
Helicases
PGUG_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
AAA_30
AAA_23
T2SSE
Motif
Other DBs
NCBI-GeneID:
5127691
NCBI-ProteinID:
XP_001486354
UniProt:
A5DFH4
LinkDB
All DBs
AA seq
753 aa
AA seq
DB search
MHSHKRQKTDSEAEKVAEAAEESLKQHPHASQNTPMKVHDEGEFAGLKRHGTTAEQAQKL
ESGSTNPFSGAKFSQKYFDILEVRRNLPVHAQRDQFLEIFHSTQIMVFVGETGSGKTTQI
PQFVLYDEMPHLVGSQVACTQPRRVAAMSVAKRVADEMDVELGQEVGYSIRFENKTSPKT
ILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLIKQVSVRRPDLKIIIM
SATLDAEKFQTYFNDAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEDDGDI
LLFLTGEEEIEDACRRIALEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPEKLTP
NGRAGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQR
AGRAGRTRPGKCFRLYTEEAFQKELVEQSYPEILRSNLASTVLELKKLGIDDLVHFDFMD
PPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAFKCSEEILT
IVALLSVPNVFVRPASARKRADEAKMAFAHPDGDHLTLLNVYDGFNSDEAHSVGLHQWCR
DNFLSYRSLSSGQNVRSQLRRIMVSHDLELISPGESRNYHNYVRKALAAGFFMQAAKKRS
GSKGYITVKDNQDVLIHPSTVLAVEPEWVIYNEFVLTSKNYIRTVTTVNPEWLVEFAPKY
FDLKHFTNGDVKLSLERVVDKVKSDKKRKKRSG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcattctcacaaacggcaaaaaaccgatagcgaagcggagaaggtggcggaggcggcc
gaagagagtctcaagcagcatcctcacgcgagccaaaatacacccatgaaagtgcacgat
gaaggtgagtttgctggtttaaagagacatggcaccacggcagagcaagcccagaaattg
gaatctggttccactaatcctttttccggggccaagttctcgcaaaagtactttgatata
cttgaggtgcgccggaatcttccggtgcatgcgcagcgagaccaattcctcgagattttc
cattccacacaaatcatggttttcgttggtgagaccggatctggtaaaaccacccaaata
cctcaattcgtcttgtacgacgaaatgccccatcttgtggggtcccaggtggcgtgtaca
cagccgcggagagtggcagcgatgtcggttgcaaagagagttgccgacgaaatggatgta
gaattgggccaagaggttggttatagtattcgttttgagaacaagacatctcccaagaca
attctcaagtatatgactgatggtatgttgcttcgtgaggccatggaagaccacgacttg
agtcggtactcgtgtatcattttggatgaggcccacgaaagaacattggctactgatatt
ctcatgggattgatcaaacaagtgagtgtccgtcgcccagatttgaaaattatcatcatg
tcggccacattagacgccgaaaagttccaaacatacttcaacgatgctccattgttggct
gtacctggtcgtactcatcccgtcgaaatttactatacgcccgagttccagcgggactac
ctcgatgcagctattcgaacggttttgcagattcatgccacggaagacgacggagacatt
cttctcttccttacaggagaagaagaaatcgaagacgcttgtcgtagaatagccttggag
ggtgatgaactcgttcgtgaacaaaactgtggccctctcaaagtatatccattgtacggt
tcacttccaccacaccagcagcaaaagatctttgagccagcacctgaaaaactcaccccc
aatggccgtgctggaagaaaagtcattgtttctaccaatatcgccgagacttcgttgact
atcgacggtatcgtttatgtggtggatccaggattttccaagcagaaagtgtacaatcct
cgtataagagtggaatccttgttagtatctccaatttctaaagcttcagcccagcaacgt
gccggacgtgctggacgtactcgtcccggaaaatgtttccgtttatacaccgaagaagcg
tttcaaaaagagcttgttgagcagtcatatcccgagattttgcgcagtaatttggcgtcg
acagtgttggaattgaaaaaattgggaatcgacgatttggtacattttgactttatggat
cctccggcgccggaaaccatgatgagagcattggaggagttgaattacttgcagtgtctt
tctgacgaaggagatttgacggcattgggacggttagcgtcgcagtttcccttggacccc
atgcttgctgtgatgttaattggatccccagcgttcaaatgttcggaggaaatactcacc
atcgttgcgttattatctgttcccaatgtatttgtgcggcccgcttccgccagaaaacga
gccgatgaggccaaaatggcatttgctcatcctgacggagaccatcttacattgttgaat
gtttatgatgggttcaattctgacgaagcccactcggtagggttgcatcaatggtgtcgc
gacaactttttgtcgtatcgttcattgtcttctgggcaaaatgtccggtcccaattgcgc
cgaatcatggtttctcacgacttggagttgatttctcctggagagagccgcaattaccac
aattatgtccgcaaagcattggcggctggatttttcatgcaagcagctaaaaagcgcagt
ggtagcaaaggatacattactgtcaaagataaccaagatgtgttgatccacccatccaca
gtgttggcggtggagcctgaatgggtgatatacaacgaatttgtgctcacctccaagaat
tatattcgtacagtgaccacagtgaatcccgaatggcttgtggaatttgcacccaagtat
ttcgacttgaagcactttaccaatggagacgtcaagttgtcacttgagcgtgtagtggac
aaggtgaaaagtgacaagaagagaaaaaagaggagtggataa
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integrated database retrieval system
