Pantherophis guttatus (corn snake): 117656067
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Entry
117656067 CDS
T07329
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117656067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117656067
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117656067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ANAPC3
ARM_TT21
TPR_7
TPR_17
TPR_MalT
DUF6058
DUF948
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
117656067
NCBI-ProteinID:
XP_034259916
UniProt:
A0A6P9AV76
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAADKGGDQGTEKHEGVGTSGITDQEKELSNSALQAFLAGNYDTCLQHLSCLQEINKDDY
KIVLNIAVAEFCKSNQTTTDNLKQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAIIIGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTCQAEKALHLLAVLEKMVSQ
GNNNKNGKAETGNNASKETNNKTESGTLTEAAKSKIHQYKVRAYIQMKSLKACKREIKSV
MNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGCI
HFAMGKHNLGIFYFKKALQENDNACAQLGTDGTDPGKKFSGRPMCTLLTNKRYELLYNCG
IQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGSLEQETKGLPSKKGIVQ
SIVGQGYHRKIVLASQSVQNIVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQESKQE
NGSKAGNQLSGNESSENTEACTKSHEGDKFIPAPPSSPLRKQELENLRCSILACSAYVAL
ALGDNLMALSHADKLLQQPKLSGSLKFLGHLYAAVALISLDRISDAITHLNPENVTDVSL
GISSNEQDQGSDKGENEAMESSGKQVPQCYPSSVTSARTMMLFNLGSAYCLRSEYDKARK
CLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKMLSEIRKKPVF
QPPHLVQTIQMPTFTTIQRK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggacaaaggcggagatcagggaacagagaaacatgaaggagtaggtacttct
ggaattacagatcaagagaaagagttatcaaacagtgcactacaagcctttttggctgga
aactatgatacttgtctacaacaccttagctgcttgcaagaaataaacaaagatgattac
aaaatagttttgaacatagcagtagcagaattctgtaaaagtaatcaaacaacaactgat
aatttgaaacaaacactgaatcaactgaaaaatcaggttcattcggctgttgaggagatg
gatggtttagatgatgttgaaaacagcatgctctattataatcaagctgttattttatat
catctgcggcagtacactgaagcaattataattggggagaaactttatcaatttattgaa
ccttttgaggaaaaatttgcacaggcagtatgttttctactagttgatttatatctcctg
acttgtcaagctgagaaagccttgcatcttcttgctgtcctggaaaaaatggtttcacaa
ggcaacaataacaaaaatgggaaagctgagacaggtaataatgctagtaaagaaaccaac
aacaagactgaaagcggaactctaacagaagctgcaaaatcaaagatacatcagtataag
gttcgagcttatattcaaatgaaatctctgaaagcatgcaagagggaaattaaatcagtc
atgaatacagctggaaattctgcaccttcactttttctgaaaagcaactttgagtattta
aggggcaattatcggaaagctgtaaagctcctgaacagctcaaatattgctgaacatcca
ggatttatgaagacaggagaatgtttacgctgcatgttctggaataatcttggttgcatc
cattttgctatggggaaacacaacttagggattttctattttaaaaaggctttgcaagaa
aatgataatgcctgtgcacagcttgggacagatggcacagacccaggtaaaaagttctca
ggacgaccgatgtgcacattactgaccaacaagcgttatgagttgttatataactgtggc
attcagcttttacatattgggaggccactagctgcttttgagtgcctgatagaagctgtc
caggtttatcattccaatcctcgcctgtggttgagaatagctgaatgttgtattgctgct
aataaagggagtttggaacaagaaacaaagggccttccaagcaaaaaggggattgtacag
tctattgtaggtcagggctatcatcgtaaaatcgtcttagcatcacagtctgtgcagaac
attgtttataatgacggccaatcttcagctattcctgtagccagcatggagtttgcagca
atttgtctaagaaatgctttgctgttgcttcctgaagatcagcaggagtcaaagcaagaa
aatggatctaaagctggtaatcagctgagtgggaatgaaagcagtgagaatactgaagct
tgcactaaaagtcatgaaggagacaaatttattcctgctccaccatcttctcccttgaga
aagcaggaattagaaaacctaagatgttccatacttgcctgcagtgcttatgtagctttg
gcactgggggacaaccttatggctctgagtcatgcagataaacttcttcagcagcccaaa
ctctcaggatcacttaaattccttggccatttgtatgctgcagtggcccttatttctctg
gacagaatctctgatgctattactcacttgaaccctgagaatgtcactgatgtgtccctg
ggaatttcttcaaacgagcaggatcaagggtctgataaaggagaaaatgaagccatggaa
tcatctggcaaacaagtaccccaatgttatcccagttctgttacatctgcacgaaccatg
atgttgttcaatcttggaagtgcctactgcttaagaagcgagtatgacaaagcgcggaaa
tgtctacatcaggctgcctcactgattcatccaaaagagattccaccagaagctatctta
ctggctgtatatcttgagcttcagaacggcaatactcagctggcattgcaaatcatcaaa
agaaaccagcttctcccttcagtgaaaatgctctctgaaatacgaaagaaacctgtattc
caacctcctcacttggttcaaactattcagatgccaacattcaccactattcagaggaag
tga
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