Pantherophis guttatus (corn snake): 117660524
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Entry
117660524 CDS
T07329
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117660524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgut04121
]
117660524
Enzymes [BR:
pgut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117660524
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117660524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
zf-RING_6
PRY
CT0912-like_C
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117660524
NCBI-ProteinID:
XP_034264579
UniProt:
A0A6P9B4S7
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MQKIGFLFLEDNIVCPICLEVFRDPVTTACGHNFCMNCLHVYWEHLALIGEQPYCPQCRE
PFSSTPQLRKNITLGEIAMRFAQEETQDPQKLASFKNVPCDFCFTRKLKAVKSCLQCIAS
LCDNHIQSHYTDKIFKNHQLVEPLSDLKGSMCAKHRKLLELFCKEEGKFICHICVREEHK
NHEVISLKQERSKKEVEIQRIHASVENQVMILVEDHQKHRARVNYLMKVVKNTRDEVSWA
FTEVLKEFKRLQTKVMDFIDQEEKAALLDMGNSIQRRHEQLADLKKQKLWLTNLLDDPSD
FQFLQDYPKIKAISDCSEALIGLKCEELSSFVGIKQTLSDLKSQISMIGLCFINKILQKG
ITMVPYELLPTPTDRKTLLKYYCILNFDATTANEELFLFKETHSVLNMGILLETYSKPTP
GFNHWPQLLGTRSLCEGCHYWEAEISNGWLCLGVAYSYRHKTEKSCMLYLIGRNNYSWCL
EWDSVNFSVWHNNIQTVLRGDYCKTIGVFLDYAAGSLTFYGITSSINLIYRFLTTFTEPL
YPAAMVSSGTSITLKRHPE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagattggctttcttttccttgaagacaatattgtatgtccaatatgccttgag
gtattcagagacccagtcaccacagcctgtgggcacaacttctgtatgaattgcttgcat
gtttattgggaacacctagctctgattggggaacaaccttactgccctcagtgccgggaa
cccttcagttcaacacctcagctccgcaaaaatataaccctgggagagattgcaatgaga
tttgcccaggaggaaactcaagatccacagaagctggctagtttcaagaatgtcccgtgc
gatttttgtttcacgcgaaagttaaaagcagtcaagtcttgcttgcaatgtatagcttcc
ctgtgtgataaccatattcagtctcactacacagacaagattttcaagaaccaccagctg
gtggaacctctcagtgacttgaaaggcagcatgtgtgcaaaacatcgtaagctgctagag
ctattctgcaaagaggaaggcaaatttatttgccacatctgtgtccgggaagagcataag
aaccatgaagtaatttctttgaagcaagaaagaagcaagaaagaagtggagatccagaga
atacatgccagtgtggaaaaccaggtcatgatattggtagaagaccatcagaaacataga
gcaagagtgaattaccttatgaaagtggtgaagaataccagagatgaagttagttgggcc
tttacagaggtattaaaagaattcaagcgactgcagactaaggtgatggacttcattgat
caagaggaaaaggcagctttacttgatatggggaattctattcagcgcagacatgagcaa
cttgcagatcttaagaagcagaaactgtggctgacaaatctgttggacgatccaagtgac
tttcaattcttacaggactacccaaaaataaaggccatatctgattgctcagaagctttg
attggactgaaatgtgaggaactcagcagttttgtggggattaaacagacactgagtgat
ttgaaatcccaaatctcaatgattggactctgcttcatcaataaaatccttcagaaggga
atcacaatggtgccatatgaactattacccacacccacagatcggaagactctcctaaag
tactattgtatcctgaattttgatgccaccactgccaacgaagagctcttcctgtttaaa
gagactcactctgtgctgaacatggggattttgttggaaacctattcaaaacccacccct
ggatttaaccactggccccagctccttggtacccgcagcctctgcgagggctgccattat
tgggaggctgagatttcaaatggctggctgtgcctgggtgttgcctacagctaccggcat
aagaccgaaaaatcgtgcatgttgtatctgattggcaggaataattattcatggtgcttg
gagtgggactcagtgaatttctctgtctggcataataatatccagactgtgctgcgtggt
gactactgcaagaccattggggttttcctggattatgctgcaggctccctgaccttctac
ggcatcaccagttccataaacctcatttaccgttttttaaccacattcactgaaccactg
tacccagctgccatggtaagcagtgggacttctattactttgaaacgacaccctgaatag
DBGET
integrated database retrieval system
