Pantherophis guttatus (corn snake): 117660847
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Entry
117660847 CDS
T07329
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117660847 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgut03041
]
117660847 (CDC40)
Spliceosome [BR:
pgut03041
]
Complex C
Other components
Step II factors
117660847 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
117660847
NCBI-ProteinID:
XP_034265040
UniProt:
A0A6P9BAK9
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MDMFSSAQTQESPERKRIDLRICQDPSGFSRAPPPWPRRATSVRVAGADAVLHLAAAPPS
AQQVMLPVVDSAPAVSVKEDVETGVHLDPTTKEVQYNPKYDTMFAPEFGPVNPFRTQQMA
APRNMLSGYTEPAHINDFMFEQQRRTFATYGYALDPSIDNYEVSTKYIGSVEEAEKNQGL
TVFETGQKKIEKRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQRELDEITAKRQK
KGKHEDDKPGEEKTVLHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWS
GHTKGVSAVRLFPFSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGN
QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDS
RTGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP
AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVTS
GDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttcagttcagcccaaactcaggagagtccggagagaaaaagaattgatcta
cgcatctgccaggacccttcaggcttttcccgcgccccgcccccctggccgaggagggcc
acttccgttcgggtcgccggggctgacgctgtgcttcacttggcggcggcgccgccctct
gcgcaacaggtgatgctgccggtagtggactcggccccagcggtgtcggtcaaggaagat
gtggaaacaggggttcatcttgatccaaccaccaaggaagttcagtataatccaaagtat
gacaccatgtttgcaccagagtttgggccagtcaatccatttaggactcaacagatggcc
gctcccaggaacatgctttctggatatacggaaccagcacatattaatgatttcatgttt
gaacaacagagaagaacatttgcaacttatggatatgcactagatccttccatagacaat
tatgaagtatctactaaatatattggatctgtagaagaagcggaaaaaaatcaaggttta
acagtgtttgaaacaggacaaaagaaaatagagaaaaggaaaaaattcaaagagaatgat
gcatctaatatagatggtttcttgggaccttgggcaaaatatgttgatgaaaaggaggtt
gcaaaaccttctgaagaagaacagagggaactggatgaaataactgcaaaaaggcagaag
aagggcaaacatgaagatgataaacctggagaagaaaagacagttttgcatgtcaaagaa
atgtatgactatcaagggaggtcttaccttcatgttcctcaggatgttggtgttaaccta
cgttcaacagtacctcctgaaaaatgttaccttcctaagaaacaaatccatgtatggtca
ggtcatacaaagggagtcagtgccgtcaggctgtttcctttttccggccatctgctctta
tcttgttccatggactgtaaaattaagctctgggaagtgtacggtgaacgaagatgtttg
agaacattcattggacacagtaaagctgttagggatatatgctttaacaatgctgggaac
caattcctcagtgctgcctatgaccgctatctcaaactgtgggacactgaaacaggacag
tgtatttcaagattcaccaacaggaaagttccttactgtgtcaaattcaatcctgatgaa
gataagcagaatctttttgtagcaggaatgtcggataagaaaattgtacagtgggatagt
cgaactggagaaattgttcaggaatatgatagacatttgggggctgtcaacaccattgtt
tttgtggatgagaaccgaagatttgtgagtacgtcggatgacaagagtctaagagtctgg
gaatgggacattccagtagattttaagtacatagcagagccaagtatgcactcaatgcca
gcagtgactttatctccaaatggaaaatggcttgcctgtcaatcaatggacaatcagatt
ttgatttttggagctcaaaacagattcaggctaaacaaaaagaaaatcttcaaaggtcat
atggtggcaggttacgcttgccaagtagatttttcacctgatatgagctatgtgacctca
ggtgatgcagatggaaagttaaatatctgggactggaagacaacaaaactctacagtaga
ttaaaagcccatgacaaagtctgcattggggcagtgtggcatccacatgaaacatccaaa
gtgatcacttgtggatgggatggtctcattaaactgtgggactga
DBGET
integrated database retrieval system
