Pantherophis guttatus (corn snake): 117661514
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Entry
117661514 CDS
T07329
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117661514 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pgut04091
]
117661514 (FREM1)
Lectins [BR:
pgut04091
]
C-Type lectins
Lecticans
117661514 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
117661514
NCBI-ProteinID:
XP_034266353
UniProt:
A0A6P9B5X3
LinkDB
All DBs
Position
Unknown
AA seq
2156 aa
AA seq
DB search
MKNIWVLLLFALNLKTTCSTFVSINQGLKVMRGQSVFLSPNELQFSIPREKDTCKIEVVM
NEPISQRVGKMTPQVFDCHFLPNEAKYTHNGCPILNEDFVMLRLYRFTETETFTETITLL
VKILEPDCNIIKMRSSALEVPEFHGLSNIINKNIITLDYNRKINLECTISLNSLETFLPA
HGQLVIGENKEELPRGDQPQSSFHTTNLKTVQNIRVSCDEFLLMGLRYQHLDPPSPNIDY
IPIRLDLTDTRSKILYKSEYAWITVQIKNAVSNQPPQPAFMAMLILEADQFILTPLSTAI
LDAEDSETPKSLLVFNITQAPQEGFITHLQDHTKSVSSFTWSSLDNMLIAYQPPNNSHTE
RRNYEVEFEVYDLYFERSVPITLYISVRTADTNAPRVSWNMGLDLLEGQSRPITWEQLQI
VDNDDISGVRLVPVDGLQHGQLTVRGGKGFMFNVLDLKTGVVRYHHDDSDSTKDSIVFRI
FDGHHSSRHRFPINILPKDDSPPFLISNVEIEVHEGETILIQSSMLQASDMDSSDDYILF
NITRSPEAGEIMKKPKTDFIGYPVTKFLQKDLFNGIIYYYHLGGEIFEDSVELVLCDSHD
PPNLSEIQIIRIRIIPVNDQLPKEFPGTNRHLILKETEIAYLTKTHLHYIDMETQDSELI
YVITSPPFFSFAHYHTDAGKLFMVESIPKLIKDPSIPSLRSFTQHAVNHMKVAYVPPMED
IGPEPQYIQFAFSISNQHGGTLYGNCFNITVLPVDNQSPEVLTHSLKVEEGGQSTITKGH
ILISDVDTKLENIRIHLVKLPLHGTVELNENPMNQRDWLTCEDLQMSKLRYHHNGSEFPQ
DHILFEATDGINSFEFILHVKVISVNDEPPVMNADLIPFMQCPEGQAVPITSEHLYATDK
DSEDMQLMFMVARPSKYGVVKRGGLVIDRFLQADVVSGTVTYEHTSGEIGLGLIFDVLTF
IVLDDEIDPDVKACCDDKASFFPVPYHKSFPVYDINITIFPVDNQPPSIATGLVFAVQEG
ASAAITSKHLYATDLDTNADDLQFVLTSPPQFGYIENILPSPGFEKSNAGISIASFHVEN
VRKMHINYVQTRHKRIEPTTDQFMLYVTDGKHRSVEAPFYVLINPTNDEEPEFMARNFTV
QEGQMKELDPSIINAVDLDVPEDILMFTVLQQPHHGFLLKGVYGNNIFHYRQAIISQHYH
EIQVDSFSMDILKNGLKPVYLHDDSDSLADDFSIQLSDGKHKVSKVISVKVIPVNDEKPV
LSRKGKIEVNMGEAQIISSAVLSAEDKDTPWEQIYYLFERVPENGHLQLKVGHDWVTLYK
GMKCTQENIDVNAVRYIHTGTLGSNNEDSFSFHLWDGSNRSPEVVFPVAIKDVENGNIAM
FMRPLTVLMGDKGLLMTDVLLAVDGTKKPEELHYVITSPPQYGQIEYVSYPGISITSFSQ
MDIAGQKVCYVHSNKASSPKDTFRFIISNGLRTKHGEFEIILETVDRALPSVVKNKGLRL
FEGSTAVLSPDVLQLSDPDTPPQNLSFLLTQFPQYGQLYNRETGLWRQNFSQQDVDNLNV
AYRHGGGGSQMDRFSFMATDGVNQGFLVNNKLQVDPLPFIIQVDSPVNTAPEIIHLHPVS
DVELLHNGNYGIYITMRSLKASDCDTEDDQIVFKILRGPQYGYLQNVTTGESIQEQFSQK
DLNSKIIFYVIDPYWEENSDDLEFQVADPEGHSALPQMLELKWSKIELQQGVYELCENEE
MLSLKITRSGYKGDSAFVAMKVDEMTALSGKDFILPPSKLIQFDPGMSTKMWNIAITYDG
LEEEDEVFEVALISPVNAVLGTRTKAIVRILDSEGGQCNSFRSTSQNIQNLWMKERPLPG
SPSSFRHSSVNLEGILLPPSKEMIAQRRDKPPKFSSVNLARNRLRVIGNGKIIHPSFIIQ
NGTDEFFKYHGMTGLKVDKDNSLPRKTKMGPVSLRSQKEPRKNVASSKKMEVLQADSSIL
VDSLSFPNRCTPNLKGLLYFEENIQKMFLCNGTAWTLWNYSDKDIKMKTCQSGWTYHDGR
CYIRITEPKTTWAIAAQTCKTRYHGHLVNVASKSHMHWLWNFSGKRPFWIGLNDQRNPGQ
LEWSNRERVVFTNWRRGPPRLSKQRRNCILAQQQGKWQRKDCRKGKAYSYICSTKL
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatttgggttctgttgctctttgcactgaatctgaaaactacctgttccacc
tttgtcagcatcaaccagggactaaaagtgatgagaggtcaatctgtcttcctgtcacca
aatgagttgcagttttccatccccagagagaaggatacatgtaaaatagaagtggtaatg
aatgagccaatctcccagagagttgggaagatgactccacaggtgtttgactgccatttt
cttcccaatgaagccaagtacactcacaacggatgcccaattcttaatgaagactttgtc
atgctaaggctatatagatttacagaaaccgaaactttcacagaaacaatcactcttctt
gtaaagatacttgaaccagattgtaatattatcaagatgcgctccagtgctttggaggtc
ccggaatttcatggcctgtctaacataattaataagaacataatcactttggactacaac
aggaagataaacttggaatgcactataagcttgaactctttagagacatttctgccagcc
cacgggcaacttgttattggagaaaacaaagaagaattacctagaggagatcagccacag
agttccttccatacaaccaacctgaagactgttcagaatatcagagtgagctgtgatgag
tttcttctgatgggacttagataccaacatttggaccctccttcacctaatattgattac
attcccatcaggctggatctcactgataccagaagcaagattttgtataagtctgagtat
gcttggattactgttcagataaaaaatgcggtttctaaccagcccccacaacctgccttc
atggccatgctcatcttagaagcagaccaattcatcctgactcccctatccacagccata
ttggatgctgaagacagtgaaacacccaaatctttgctagtctttaatatcacccaagca
ccccaggaaggcttcataacacacctgcaagaccacactaaatctgtctcatccttcacc
tggagcagcctggataacatgctgattgcatatcaacctccaaacaacagccatacagag
agaagaaactatgaggtggaatttgaagtttatgatttgtactttgaaagaagtgtgcca
attactctttatatctctgtgagaacagcagacacaaatgcaccaagggtttcatggaac
atgggtcttgatctcttggaaggtcagtctcgccccataacatgggagcagcttcagatt
gtagacaatgatgatatcagcggagttcgcttggtccctgtggatggattacaacatggg
cagcttactgtaagaggagggaaaggattcatgttcaatgtcttggatcttaagactgga
gttgttcgttaccatcatgatgacagcgattccaccaaagactccattgtctttaggatc
ttcgatggccaccacagtagccgccacaggtttccaatcaatattctgcccaaagatgac
agccccccttttctcattagtaatgttgaaatagaggtccatgaaggagaaacgatcctg
atccaaagctcaatgcttcaagcatcggatatggactctagcgatgactacatactcttc
aatattaccagatcaccggaagcaggagaaataatgaaaaaacctaaaacagattttatt
ggttatccagttactaaattccttcaaaaagacctgtttaatgggataatttactactat
cacttaggaggagaaatatttgaagattcagttgagttggttctatgtgatagtcatgat
cctcccaatctttcagaaattcagataataagaatacgcataattcctgtgaatgatcag
ctgccaaaagaatttccaggaacaaaccgtcatctgattctcaaggaaacggagattgct
tatttaacaaagacacaccttcattacatagatatggaaacccaggacagtgagctaata
tatgtcataacatctcccccattcttctcctttgcacattaccacacagatgctggaaaa
ttattcatggtagagagtattcctaagcttatcaaggatccatctattccatcactaaga
tcgttcactcagcacgccgtaaaccacatgaaagttgcctatgtgccacccatggaagat
attggtcctgaacctcaatacatacagtttgcattttccatcagcaatcaacatggggga
actttgtatggcaactgttttaacattactgttcttccagtggacaatcagtctccagag
gtgcttacacacagcttgaaagtggaagaagggggccagagcaccattaccaaaggccat
attttgatttcagatgtggacaccaagctggaaaacatacgtatacatctcgttaagctt
cctcttcatgggactgttgaattaaatgagaatcctatgaatcaaagagattggctgaca
tgtgaagatttacagatgtccaaactcaggtaccatcataatggttcagagtttccacag
gatcatattctttttgaggctacagatggcatcaattccttcgaattcatcctccatgtg
aaggtaatttctgtaaatgatgagcccccggtgatgaatgctgacctcattcccttcatg
caatgtccagaaggacaggcggtgcccatcacttcagagcatctctatgcaactgataaa
gatagtgaagacatgcagctgatgttcatggttgcccgaccttctaagtatggggttgtg
aagagaggcggacttgtgatagatcgctttctccaagctgatgttgtttctggaacagtg
acatatgaacatacaagtggcgagattggcctaggtcttatctttgatgttcttaccttt
attgtgttggatgatgaaattgatcctgatgtaaaggcctgttgcgacgataaagcttca
ttttttcctgtaccatatcataaatcctttccagtatatgatattaatatcacaatattt
ccagttgacaaccagccaccatccattgccacaggacttgtgtttgctgtgcaggaaggt
gcctcagcagctatcacaagtaaacacttgtatgccactgatcttgacaccaatgcagat
gacttacagtttgttttaacatcccctccccagtttgggtacatagaaaatatattacca
tcgcctggttttgagaaaagtaatgcagggataagtatagcttcatttcacgtggaaaat
gtgaggaagatgcatattaactatgttcagaccaggcacaagagaattgaaccaactaca
gaccaatttatgctgtacgtcactgatgggaagcatcgttcagtggaggcaccattttat
gtcttaattaacccaaccaatgatgaagaaccagaattcatggcaaggaattttacagtg
caagagggacagatgaaggagttggatccatcaataatcaatgctgttgatttggatgta
ccagaagatatcctcatgtttactgtccttcaacagccccaccatgggtttcttcttaag
ggagtatatggcaacaatattttccattacaggcaggcaattattagtcaacactatcat
gaaattcaggtggatagtttctccatggatattttaaaaaatggattgaagcctgtgtat
ctacatgatgactctgacagtttagctgatgacttttcaatccagctgtcggatgggaaa
cataaagtgtcaaaagtcatttcagttaaagttattccagttaatgatgaaaaaccggtg
ctgagcagaaagggtaagatagaggtgaatatgggggaagcacagataatatctagtgct
gttttgtcagctgaagataaagatactccttgggaacaaatttattatctgtttgagaga
gttccagaaaatggacatcttcagcttaaggtaggacatgattgggtgacactgtacaaa
ggaatgaaatgcacccaggagaatatagacgtgaacgctgtaaggtatatacacactgga
actcttggatcaaacaatgaagacagcttctcctttcatctttgggatggaagcaacaga
tctccagaagtggtttttcctgttgctattaaggatgtggaaaatggaaacattgcaatg
tttatgagaccgctcactgtgttgatgggtgacaaaggtctcctgatgactgatgtcctc
ctggcggttgatggtaccaagaagccagaggagctacactatgtgattacttctccacca
cagtatggacagatagaatatgtcagctatcctggaatctccattacaagtttcagccaa
atggatatagcagggcagaaagtctgctatgtccacagtaataaagcatcttcccctaaa
gatacattcagattcatcatcagcaatgggctaagaactaaacatggagaatttgagatc
atcttggagacagtggatcgagctttacccagcgtggtcaagaacaagggcctgagactg
ttcgaaggcagcacggcagttctttctccagatgttctccaactttcagacccagataca
ccaccacaaaatctttcttttctcctaacacagttcccacaatacggtcaactatataac
agggaaactggattatggcggcaaaacttcagccaacaagatgtggacaatctgaatgta
gcctacagacatggaggaggtggttctcagatggacaggttttcatttatggcaacagat
ggagtaaatcaaggatttcttgtaaacaacaagctgcaagtagatcccttgccgtttatt
attcaggtggatagtccagtaaacacagccccagaaattattcatcttcatccagtttca
gatgtggaacttttgcacaatggcaactatggaatttacattacaatgcgatccttgaaa
gcatcagattgcgatactgaagatgatcaaattgtttttaaaattttacgaggacctcag
tatggttacttgcaaaatgtaacaacaggagaaagtattcaagaacaattcagccagaaa
gatttaaatagcaaaataatattttatgtcattgatccttactgggaggagaattcagat
gatctggaatttcaggttgcggatcctgaaggacattctgccctcccccagatgttagaa
ctaaaatggtctaaaattgaactgcagcagggtgtgtatgaactgtgtgaaaatgaggag
atgctatctttaaaaatcacccgatcaggatacaagggagattctgcttttgtggcaatg
aaggttgacgaaatgactgctttatcgggaaaggatttcatccttcctccttcgaaactt
attcagtttgatccaggaatgtcaaccaagatgtggaatatagcaattacctatgatgga
ttagaggaagaggatgaggtctttgaagtggctctgatctcccctgtgaatgctgttctt
ggcactcggacaaaagctatagtgagaattttggactcggaaggaggtcagtgcaattca
ttccgttccacaagccaaaatattcagaacttatggatgaaagaaagaccgcttccaggt
tctccttcatctttcaggcacagcagtgttaatctggaaggaatcctgctgcccccttcc
aaagagatgatagcacagagacgggacaagccacccaaattcagctcagtgaatcttgcg
aggaaccggctacgggtcatcggaaatggcaaaataattcatccctcttttattattcaa
aatggcacagatgagtttttcaaataccatgggatgacagggctaaaagtagataaggac
aattctttgcctagaaaaaccaagatgggacccgtatctttaagaagccaaaaagaacca
agaaaaaatgtagcttcctccaagaaaatggaagttcttcaagcagactccagcattctg
gttgacagcctttcatttccaaatagatgcacaccaaatttgaagggtctcttgtatttt
gaagaaaacatacagaagatgtttctgtgcaatggtactgcctggacattatggaactac
tcagacaaggatattaaaatgaaaacttgtcagtcaggatggacctatcatgatggaaga
tgctatatccgaatcactgagccaaaaaccacatgggcaattgctgcccaaacttgcaag
acacggtaccatggccatttagtaaatgtggcttccaaatcacacatgcactggctctgg
aactttagtggaaaaagacctttttggataggtttgaatgatcagcgaaacccaggtcag
ctggaatggagcaacagggaacgtgttgttttcacaaactggagaagaggcccacctcgt
ctttcaaagcaaaggaggaactgcattttagcacaacagcaaggaaaatggcaaagaaaa
gactgcaggaagggcaaagcatacagttatatatgttccacaaaactgtaa
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integrated database retrieval system
