Pantherophis guttatus (corn snake): 117661682
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Entry
117661682 CDS
T07329
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117661682 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117661682 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
pgut03016
]
117661682 (ZCCHC7)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
117661682 (ZCCHC7)
Transfer RNA biogenesis [BR:
pgut03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
117661682 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
117661682
NCBI-ProteinID:
XP_034266655
UniProt:
A0A6P9BEE9
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MLFSGYGDAEAFEDDPYSEGSSSETSIDSEVEFHLYSQVHYAQDLGDVSENNNKDVKGQE
EFKSLKKEKSENEQDQRNNLIVISDSVSSDSSDVIILSDTLEEDSIYESKLQKLTTSVSP
TLRKLNKTAYSRAKKSSRPILKSEDQTTVNSSKAKKANEKAILNNQDDVHMIHRVLVTED
SSSSDDAVDVSSISSESDNVESWMLLGSAADDKDDDILLNLEGCRTSASGGEDRTGWTIS
DKDLQAQIGNYVSVRHNNRYYTADKNVTCRNCDKRGHLSKNCPAPKKIPPCCLCAQRGHL
QNSCPARFCLNCCLPGHCSRECPERMYWKKHCNRCDMRGHYADACPEIWRQYHLTTRPGP
LKTADSYSVQPASAYCYNCGEKGHYGFECLEKRMFGGTFPTFPFIYYYDNEYDIKRSLQR
AKKKVQELQDAGLLPKSPKRLHIDYDREEHKRKKKREVWKEHGKRGDHKNLRKKSHADLV
KERKRKKEVQNNYMIEECFPRGGHVNAHKRCRRKTPYHQSGGFLADGKTENHRVSVESAK
RRKRKKKQRSHSNNSCTRDESLFLIKQKKKKMTPKASLI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttattcagtgggtatggcgatgcagaagcatttgaagatgatccttattctgaaggg
tcttccagtgaaacaagcattgatagtgaagtagaatttcatctttacagtcaagtccat
tatgcacaagaccttggggatgtcagtgaaaataacaataaggatgtcaaaggacaagaa
gaatttaagtccttgaagaaagagaaatcagagaatgaacaagatcagagaaataactta
attgtcatttcagatagtgtcagttcagatagctcagatgtcataatattgtctgatacc
cttgaggaagatagcatttatgaaagtaaactccagaaactaacaacatcagtgtctcca
acattacgtaaattaaataagactgcttactctcgtgccaaaaaatcttcccggcctatc
ctgaaatctgaggatcagactacggtaaattcaagtaaagcaaaaaaggctaatgaaaag
gcaatcttaaataaccaggatgatgttcacatgattcatagagttttagtaactgaggac
agctccagcagcgatgatgcagttgatgtgtcaagtatatcctctgaaagtgataatgtg
gagagctggatgctgctgggaagtgccgcagatgacaaagatgatgatatcctgttaaat
cttgaaggctgtagaacttcagccagtggaggagaagatagaacaggatggaccatcagt
gataaagacttacaggcacagattggtaattatgtttcagtgcgacataacaacagatac
tacacagcggacaaaaacgtcacttgcagaaattgtgataaacgaggtcatttatcaaaa
aattgccctgccccaaagaaaattccaccctgttgtctatgtgcacagagaggtcacctg
caaaacagctgtccagcacgattttgtttaaattgttgtttgccaggacactgctctaga
gagtgccctgagagaatgtactggaaaaaacattgcaaccgctgtgatatgagaggtcat
tatgcagatgcttgcccagaaatatggaggcagtatcacctaacaactagaccaggacca
ctcaagacggctgactcttattctgtgcaacctgcttcagcatactgttacaactgtgga
gagaaaggccactatggatttgaatgcttggagaagcgaatgtttggaggaacatttcct
actttcccctttatctattactatgacaatgaatatgacatcaagaggagccttcagaga
gcaaagaaaaaagtgcaagaacttcaggacgctggccttctaccaaagtctccaaaaaga
ctacatatagattatgatcgagaagagcacaaacgtaagaaaaagagggaagtttggaag
gaacatggcaagaggggagatcataagaacctaaggaaaaagtctcatgcagatctagtg
aaagaaaggaagcgtaagaaggaagttcagaacaactatatgatagaagagtgctttcct
agaggtggccacgtgaatgcacataagaggtgcagaaggaaaactccttatcatcaaagt
gggggctttctggcagatggcaaaactgaaaatcaccgagtttctgtggagtcagccaaa
aggcggaagagaaagaaaaagcagaggagccactcaaacaatagttgcaccagggatgaa
agtttatttcttatcaaacagaagaaaaagaaaatgacaccgaaagccagcttgatctga
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