Pantherophis guttatus (corn snake): 117661781
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Entry
117661781 CDS
T07329
Symbol
HMGB1
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03410
Base excision repair
pgut04140
Autophagy - animal
pgut04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117661781 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117661781 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
117661781 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgut03036
]
117661781 (HMGB1)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117661781 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgut04147
]
117661781 (HMGB1)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
117661781 (HMGB1)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117661781 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
117661781 (HMGB1)
Exosome [BR:
pgut04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117661781 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
HMG_box_5
NOA36
Motif
Other DBs
NCBI-GeneID:
117661781
NCBI-ProteinID:
XP_034266800
UniProt:
A0A6P9BFR8
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMKSYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSSEDKQPFEKKAAKLKEKYEKDIAAYRAKGKPDAAKKVAPKPEK
SKKKKEEEDDDEDDEEDDEEEEEEEEEDDEEEDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcgtatgcctattttgtg
caaacctgccgggaagagcacaagaagaaacacccagatgcttcagtgaatttctcagag
ttctcaaagaaatgttcagaaaggtggaagactatgtccgctaaggaaaaggggaaattt
gaagatatggcacgagctgacaaggttcgttatgaaagagaaatgaaaagctatgtaccc
ccaaaaggagagtcaaaaaagaaattcaaggatccaaatgcaccaaagaggcctccttcg
gcatttttcttattttgttccgagtatcgtccaaaaatcaaaggagaacatcctggtctt
tccattggggatgttgcaaaaaaacttggagagatgtggaataatacatcctcagaggat
aaacagccctttgaaaagaaggctgctaaactgaaggagaaatatgaaaaggatattgct
gcataccgagctaagggaaagcctgatgcagccaaaaaggtagctcctaagcctgagaaa
agcaagaaaaagaaagaagaggaagatgatgatgaggacgatgaagaggacgacgaggaa
gaagaggaagaagaagaggaggacgacgaggaagaagatgatgaataa
DBGET
integrated database retrieval system
