Pantherophis guttatus (corn snake): 117662295
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Entry
117662295 CDS
T07329
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgut04515
]
117662295
Cell adhesion molecules [BR:
pgut04515
]
Cadherins
Protocadherins
117662295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Calcyon
DUF6476
Syndecan
Motif
Other DBs
NCBI-GeneID:
117662295
NCBI-ProteinID:
XP_060547136
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MYLFWLLCLPKALCISIYYSSPEETNSGSKVANVLKDLKLEEQEFIDRRAHLISESTKQY
FSLDIHTGDILINDKVDRDILCSQTDPCILTSQIVLDNPLESYNIEIVIEDINDNAPKFS
KNEFEIKIPENIPTNMALPLESADDKDLGENSIQNYTLSTNEYFWLHVQRNKDGINNVDL
VLKRSLDREKVPHLNITLMAVDGGVPQNTGTVQINIDILDINDNPPQFSQSEYKVKIKEN
LPTGTVVAKVEATDLDLGLNAQVTYSFHRTPERINSLFLLNERSGEITLRGQIDYEKERS
YSINIRATDGGGLSGHCKILIEVEDVNDNAPEVSILSLTSSLKEDSALEKVVALFSLKDQ
DSGDNSKMVCSIEMNLPFVLKATTNNFYQLVLQSPLDRERVSEYNITITAIDWGSPRLTS
TRLINVQISDVNDNPPLFEKSSYDMQIRENNIPGFLIGSVHALDLDTMLNAKVTYLVLPG
KGDGLVTPYISVNSETGNMYALRSLDYEQIRGFSITVRASDGGSPSLSSEVIVRIHIIDE
NDNAPFFLYPLQNNTSPCNELLPKSAEAGYLITKVVAVDADSGQNSWLSYELLKATDPAL
FSIGVQNGEVKTRRALNERDTNKQRLVILVRDNGLPPQTSTALLNVLLVDGFSDPFLRRV
DVSVQEPEEDKTLTKYLVICLAAVSFVFLVCIVVLIVVKVFKKDPQSQFPTTHPHFPPAN
SDIPENCADPQTGSLSKTYHYDVRLTGGSLSSEFHFLRPLFPVFSVGDVNIPGYHKNSGC
EDISEQGADSQLH
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttttttggttgctttgtcttcctaaagcattatgtatttcaatctactattct
tcacctgaagaaaccaacagtggttctaaagtggctaatgtgttgaaggatttgaaactg
gaagaacaggaattcattgatcgcagagcccatctcatttctgaaagcactaagcagtat
ttctcccttgatattcatactggggatatattgataaatgataaagtagaccgggacatt
ctgtgtagccagacagatccttgcatacttacatctcaaattgtgcttgacaaccctttg
gaatcatacaatattgaaatagtaatagaagacataaatgacaatgctcccaaattctct
aaaaatgaatttgagataaaaattcctgagaatattcctacaaatatggcacttccctta
gaatctgcagatgataaggatctaggagaaaacagcatccaaaactatacactcagcacc
aatgaatatttttggcttcatgtgcaaaggaacaaagacggaattaacaatgtggatctt
gttctaaagagatcactagatagagaaaaggtgccacatctcaatatcaccctaatggct
gttgatggtggggtaccacagaacacaggcactgttcaaattaacattgatattctggac
ataaatgataaccctcctcaattttcccaatctgaatataaggtaaaaataaaggaaaac
cttcctacaggcactgtggtggctaaagtggaagctacagatcttgatttgggtttaaat
gcacaagtcacctattcattccatagaacacctgaaagaataaacagtttgttcctttta
aatgaaagatctggagaaatcactcttaggggacagattgattatgaaaaagaaaggagt
tatagcataaatatcagagcaacagatggaggaggactttcggggcactgcaagatactt
atagaggttgaagatgtcaatgacaatgccccagaagtgtccattctatctctgaccagc
agcttaaaggaggattcggctttggagaaggtggtggccctcttcagtcttaaagaccaa
gactctggagacaacagcaaaatggtctgctccatagagatgaatctcccttttgtgttg
aaagccaccacaaacaacttttatcagcttgtgctccaaagtcccctagatagagaaaga
gtctctgagtacaacatcactatcactgccattgactggggatctcctaggctcacttca
acaagattgattaatgttcagatctctgatgtcaatgataatcctcccctttttgaaaag
tcttcatatgacatgcagatcagggagaataatattccaggcttcctcattggctcagtc
cacgctctggatctggacacaatgctgaatgctaaagtgacttacttagttctgcctggg
aagggtgatggcctggtgaccccttacatctcagttaactctgaaactggaaacatgtat
gctctccgatccctggactatgaacagataagaggcttcagtattactgtgagggcatct
gatggtggttctccttccttgagctcagaagtgattgttcgaatccacatcatagatgag
aacgacaacgctcccttcttcctgtatccccttcagaacaacacatccccatgcaatgag
ctgcttcccaagtcagccgaggctggctatctgatcaccaaggtggttgcagtggacgca
gattctggccaaaactcttggctttcctatgaattgctgaaggccacagatccagccctt
ttcagcataggagtacagaatggggaagtgaaaacgaggagagccctgaatgagcgagac
acaaacaagcagaggctggtgatactggtcagagacaatggtctccctccacagaccagc
acggcattgcttaatgttcttcttgtggatggcttttcggatcccttcctaaggagggtg
gatgtcagtgtacaagaaccggaagaagataaaaccttgaccaagtatttggtgatctgc
ttggctgcagtctcctttgtgttcctggtctgtattgttgtgcttattgtggtcaaagtg
ttcaagaaggacccccaaagccaatttcctactactcatcctcacttcccacctgccaat
tctgatattccagaaaactgtgctgatccacagaccggatctctttcaaagacttatcat
tatgatgttcgtttgactggtggatccttaagtagcgagttccattttctcaggcctctc
tttccagtgttttcggtgggagatgtaaatattcctgggtaccacaagaattctggctgt
gaagatatctctgagcagggtgcagatagccaattacactaa
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