Pantherophis guttatus (corn snake): 117662370
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Entry
117662370 CDS
T07329
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03008
Ribosome biogenesis in eukaryotes
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117662370 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
117662370 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117662370 (XRN2)
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117662370 (XRN2)
03009 Ribosome biogenesis [BR:
pgut03009
]
117662370 (XRN2)
03016 Transfer RNA biogenesis [BR:
pgut03016
]
117662370 (XRN2)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117662370 (XRN2)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
117662370 (XRN2)
Ribosome biogenesis [BR:
pgut03009
]
Eukaryotic type
Pre-60S particles
RNases
117662370 (XRN2)
Transfer RNA biogenesis [BR:
pgut03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
117662370 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
117662370
NCBI-ProteinID:
XP_034267660
UniProt:
A0A6P9BI86
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVSCTEEKAKECNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEGAEEKQRIRQEIIEKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEIKDCQGLPREKQGEHDQFADCPPGMEQE
FIFIRLCVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTENGYVNLERVQMIMLAVGEVEDSIFKKRKDDEENFKRRQKE
KRKRMKREQHTMLGGQYTPQPLGRGNRSSHQPISNPRHTAYEMRMQDRQNTTPSVSPNLS
FTSDGTPSPAGGIKRKIEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDINDKKFRRKVV
QSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMVSDFEKGTNPFRPLEQLM
GVFPAASGNFLPPTWRKLMTDPDSSIIDFYPEDFAIDLNGKKFAWQGVALLPFVDERRLR
AALTQVYPNLTSEETRRNSLGGDILFVGKHHQLHDFILEQYKSNEKEPVDIPPELCHGIQ
GELTLNEYPILPDESVQSPVPLLRDLTQNSAISINFKDPQYQDDYIFKAVVLSGAKKPAA
VLKPGDWEKSNNDGRSWKPQLGFNRDRRQVHLDQSAFRTLGHAMSRDRGQSGSGVYSNIG
PPGAYNQGNTYRPLLGRPQHQIPKLLSNLRPQDSWQAPTPLFQQPPQRFDRNSGATPLLA
WNRMPHSQGSPYQQNQYQGPGGPGGLMNYPQRPSDQRERGRQGYGRPYPLPPSSGRYNWN
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcccggcatttttccggtggctgagccgcaaatacccctccatcatcgtgtcc
tgcactgaggaaaaggctaaagaatgtaatggtatcaaaattccagttgacactagtaaa
ccgaatcccaatgaagtggaatttgataatttatacttggatatgaatggcattattcat
ccttgtacacatcctgaggacaagccagcacccaaaaatgaagatgaaatgatggttgca
atttttgagtatattgataggctattcaacattgtgagaccaaggcgacttctctacatg
gcaatagatggagtggctccccgggcaaagatgaatcaacaaagatctagaagattcaga
gcatcaaaagaaggaatggagggtgcagaagagaaacagagaattaggcaagaaattata
gagaaaggtggctttctacctccagaagaaattaaggaaagatttgacagcaattgcata
actccaggaacagaatttatggataatcttgctaaatgtcttcgttattatattgctgat
cgtttaaataatgatccgggatggaaaaacttaacggttattttatctgatgcaagtgct
ccaggtgagggtgaacacaaaataatggattacatacgaaggcaaagagcccagccaaac
catgatccaaatactcaccactgtttatgtggtgctgatgctgaccttattatgcttgga
ttagctactcatgaaccaaattttactataatcagagaagaatttaagcctaataaacct
aaaccatgtggtctttgtaaccaatttggacatgaaattaaggactgtcaaggcctacca
agggaaaaacaaggggagcacgatcagtttgcagattgtcctcctggtatggaacaagaa
tttatatttattcgcttatgtgttttgagagaatatttggaaagagagctaacaatggcc
agcttgcctttcacttttgatgttgaaagaagcatcgatgactgggttttcatgtgtttc
tttgtgggaaatgattttctccctcatttaccctcattagagatcagggaaggagcaatc
gatcgcctggtgaacatatataaaaatgttgtgcacaaaactggaggttatcttaccgaa
aatggttatgtcaacttggagagagtacagatgataatgttggctgttggagaagttgaa
gatagcatttttaagaagcggaaagatgatgaggaaaatttcaaaagaaggcaaaaagaa
aaaagaaaaagaatgaagagggaacaacatactatgcttggtggacaatacaccccacaa
cctttaggaagaggaaacaggtcaagccatcaaccaattagtaatccaagacacacagcc
tatgaaatgagaatgcaggacagacaaaacactactccttcagtttctcctaatttgagc
ttcacatctgatggtacgccatccccagcaggaggaattaagcgaaaaatagaggacagt
gacagtgaaccagagcctgaagataatgtcaggttatgggaagctggctggaaacagcgc
tattacaagaacaaatttgatgttgatatcaacgataagaagtttcgtcgtaaagttgta
cagtcttatgtggaagggctttgctgggttctccgatactattatcaggggtgcgcttcc
tggaaatggtattatcctttccactatgcaccatttgcttcagattttgaaggtattgca
gacatggtctcagattttgagaaaggaaccaacccattcagacctctggaacaactgatg
ggtgtcttcccagctgccagcggtaatttcctcccaccaacatggcggaaacttatgact
gatccagattcaagtataattgacttctatcctgaggacttcgctattgatctgaatggg
aaaaaatttgcttggcaaggggttgctctgttgccttttgttgatgaacgccgtctaaga
gctgctttgacacaggtgtatcccaacctcacttctgaagaaaccagaagaaatagtctt
ggtggtgatatcctttttgttgggaaacatcatcagcttcatgacttcattcttgaacag
tataagtctaatgaaaaagagccagtagatataccccctgaactgtgtcatggaatacag
ggagagctcaccttgaatgaatatcccatccttccagatgaatcagtgcaatctcctgta
ccgctgctgcgtgatctgacacagaattctgccataagtatcaactttaaagatccacaa
taccaagacgactatatttttaaggcagttgtattatctggagcaaaaaaacctgcagct
gttctgaagccaggtgactgggagaaatctaataatgatggcaggtcttggaagccacag
cttggctttaatcgtgataggagacaggttcacttggaccagtcagcattcagaacatta
ggacatgcaatgtcaagggacagaggacaatcaggaagtggagtatacagtaatattggc
ccccctggggcttacaatcaaggaaacacgtatagaccattgctaggcagaccacagcat
cagattcccaaattgctgtcaaatcttaggccccaagattcctggcaagctcctacacct
ctatttcaacaaccaccacaaagatttgacaggaattctggagccactcctcttcttgcc
tggaaccgcatgccccattcccagggatcaccatatcaacaaaatcaatatcaaggtcca
gggggtccagggggactcatgaattacccacaaaggcccagtgatcagagggaacgtgga
agacagggttatggaagaccttaccctttgccaccctcgtctggaagatacaactggaat
tag
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integrated database retrieval system
