Pantherophis guttatus (corn snake): 117662489
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Entry
117662489 CDS
T07329
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117662489 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117662489 (DROSHA)
03009 Ribosome biogenesis [BR:
pgut03009
]
117662489 (DROSHA)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117662489 (DROSHA)
Enzymes [BR:
pgut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
117662489 (DROSHA)
Messenger RNA biogenesis [BR:
pgut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
117662489 (DROSHA)
Ribosome biogenesis [BR:
pgut03009
]
Eukaryotic type
90S particles
RNase
117662489 (DROSHA)
Prokaryotic type
rRNA processing factors
117662489 (DROSHA)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
117662489 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
117662489
NCBI-ProteinID:
XP_034267828
UniProt:
A0A6P9BAD8
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGRGGVTVRASSQTFRPQNLRQIHPQQSSMQYQYDQQPATTSIYANPPTP
NYVPPRPDFVPYPPPIPPSPQNSITQCPPRPPFSGPQMRQTFPLPPCFPPAPPPVPNPGN
PPVLANATGQNTFPYMMPPPSIPHSVPPPVMPQQVNYQPAYSPGYSQQTFSPPNFNNYQH
SANSYQSNSGSANSGGSTSSNFRHPSEYQVEKSQTDRRSPERGKYYDEHRHRDHSHGHGD
RHRSTNHGDRRDRGRSPDRRRAESSRHRSDYVRGKTPPRHRSYEWYREHQKDRHRHRDSR
RSPSTEKSYKKDHKRTGSRSPSQDRKRPRWEEDRERWSENANREKGYTSIKDKEPEEATG
EKNEEEDQDLLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYEKFEEELGKRQA
KAKAARPPWEPPKTKLDEDVGSSSDSECDSEDDSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLFHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLIGPSSENSDTSCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSSGMKPSSVRIDQLD
REQFNPEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
VQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDRLIGYTFNDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDKDLREVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTDFEDAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMCAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQEKDLDDPEDMRK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcattccgggcgtgggtgcccccgaggcagaggaggagttactgttcgagct
tcgtcacaaacctttcgcccccaaaacttgagacagatacatcctcagcagtcttcaatg
cagtatcagtatgatcagcaacctgcaaccacctccatctatgcaaaccccccaactcca
aactatgtccctcctaggccagattttgtcccatatcccccaccaatccccccttcgcct
caaaattcaatcacccaatgtcctccccgacctcctttttcaggtcctcaaatgaggcag
accttcccgcttcctccttgtttccccccagctcctccccctgtcccaaatcctggtaat
cctcccgttctagccaatgcaactggacaaaacaccttcccttacatgatgccacctcca
tccataccacattccgtgcctccaccggtaatgcctcaacaggtaaattaccagcccgcg
tattctccaggatattcccagcagaccttctcacctcctaactttaataactaccaacac
agtgcaaactcttatcaaagcaacagtggtagcgctaatagcggtggtagcaccagcagt
aacttccggcatccaagtgaataccaggtagaaaaatctcagactgaccggaggtctcca
gagaggggtaaatattatgacgaacatcgccatcgggatcacagccatggacatggggat
cggcatcggtccactaatcatggggaccggcgggatcgtgggaggagcccagatcgccgg
cgggcagaaagtagtcgtcatagatcggattatgtcagaggaaaaaccccaccgcgccat
cggagttatgaatggtacagggaacatcaaaaggacaggcacaggcaccgggacagtcga
cggtcgccatctacagaaaagtcgtataagaaagatcacaaaagaacaggaagtcgatct
cccagccaggaccgaaagagaccccgttgggaagaagacagggagcggtggtcagaaaat
gccaacagagagaaaggttatacctccatcaaggacaaagagccagaagaggctacaggt
gaaaagaacgaggaagaagatcaggatctattgaagccagtgtgggttcgttgtacccat
tcagaaagctactattcaaatgatcccatggatcaagtgggggattccacagtggtggga
acgagccggctcagagatttgtatgaaaaattcgaagaagagctaggaaagcgtcaagca
aaggccaaagctgccaggcctccatgggagccacctaaaaccaaactagatgaagatgta
gggagctccagtgattccgagtgtgactcagaagatgacagctgttccagcagttccgac
tcagaggtttttgatgtcattgctgaaattaagcggaagaaggcccaccctgatcgtctg
cacgaggagctgtggtacaatgatcctggacagatgaacgatgggcctctttgcaaatgt
agtgccaaagccaggagaacagggataagacatggaatctatcctggagaagagcctatt
aaaccttgccgtcctatgaccaacaacgctggacgattgttccattaccgcattacggtg
tcacctcctaccaacttcttaacagacagacccaccgtcatagagtacgatgaccacgag
tacatttttgaaggattttccatgttttcccatgctcctctcacaaatattcctctgtgc
aaagtaatcagatttaacattgattatacaattcatttcattgaggagatgatgcctgaa
aacttttgtgtccgaggcctggaactcttctcttcttatctcttcaaagatattttagaa
ctgtacgattggaatctgattggtccttcatcagaaaacagtgatacttcatgtcctcgg
ttccatttcatgccacgcttcgtaagatttcttccagatggcgggaaggaagttctctca
atgcatcagatcctcctgtatttgttacgctgcaataaaccgctcgtgccagaagaagag
attgccaatatgctacagtgggaagagctggagtggcagaaatatgccgaggaatgcaaa
ggaatgatagtgaccagctctggcatgaagcccagttctgttcgcattgatcagttggat
cgtgagcaattcaaccctgaagtgattacttttcccattatcgtccattttggaatacga
ccagctcaactcagttatgctggagacccacagtaccaaaaactctggaaaagttatgtg
aaattacgccacctgctggctaatagtcccaaagtgaaacaagcggataaacagaaatta
gttcagagagaagaagccctgcaaaaaatcagacagaagaataccatgcggcgggaagta
acggttgagctgagcagccaaggattctggaagacgggaattcgttctgatgtctgtcag
catgccatgatgcttcctgtcctaacacaccacatccgttaccatcagtgtttgatgcat
ttggacagactaataggctacacttttaacgaccggtgtttattgcagcttgctatgact
cacccaagccatcatttgaactttggaatgaatccagaccatgccagaaattccttatca
aattgtgggattcggcaacccaaatatggggataggaaagttcaccatatgcatatgagg
aagaaaggtataaatactttgatcaatattatgtcacgtcttggtcaagatgatccaact
ccttccaggattaaccacaacgaacgcttggaatttttgggagatgctgtggttgagttt
ttaactagtgtccatctgtactatttgttcccaagcttggaggaaggaggattagcaaca
taccgtactgccattgttcagaatcaacatcttgcaatgctggctaagaagctggagctg
gatcgttttatgctttatgctcatggacctgatttatgcagagaatcagacctgcggcat
gctatggccaactgctttgaagccttgataggggcagtttacctggagggaagtctggaa
gaagccaaacaattgtttggacgcctgctctttaacgacaaggacctgcgggaagtatgg
cttaattatccgctacaccctctgcaactgcaagaatctaacactgacagacagctgatt
gagacgtctcctgtcctccagaaattgactgactttgaggatgctattggagtaattttt
actcacgttcgcctcttggcgcgggctttcactttgagaacagttggatttaaccatctg
acgctgggccataatcagaggatggagtttttgggtgattccataatgcagttggtggcc
accgagtacttattcatacatttccctgatcatcatgaaggccacttgacgttgttgcgc
agctctttggtcaacaacaggacacaagccaaagtggcagaagaactgggcatgcaggag
tttgccattactaacgataagaccaaacggcctgtcgcactgcgaacaaaaacattagct
gatcttttggaatcctttatcgctgctctgtacatagataaagatctggaatatgtccac
accttcatgaacgtctgctttttcccacgattgaaagaattcatcctaaatcaggattgg
aatgatccaaaatctcaactccagcaatgctgtttaactctcagaacagaagggaaggag
ccagacattcctctgtataaaacactgcaaacagttggaccttctcatgctaggacatac
actgtggctgtttacttcaaaggcgagagaataggatgtgggaagggaccaagcattcag
caagcagagatgtgtgcagcaatggatgcactggaaaaatataattttcctcagatggcc
catcaaaaacggttcattgaacggaaataccggcaagagcttaaagaaatgaggtgggaa
cgagaacatcaagaaaaagatctagatgatccagaagacatgagaaaataa
DBGET
integrated database retrieval system
