Pantherophis guttatus (corn snake): 117662728
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Entry
117662728 CDS
T07329
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
pgut
Pantherophis guttatus (corn snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117662728
NCBI-ProteinID:
XP_034268177
UniProt:
A0A6P9BA65
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All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MIYLLLQIMTILLAPTWLIIYLGLLRSIQAGAYYGIKPMPPQVPQYQPLGQQVPHMPLGK
DGVPMQHMGKEGPHLSYGKEYIPQYIKEIPQIPMLGKERISKKQKELPLASLRGEQGPPG
EPGARGPPGSPGLPGHGVPGAKGKPGPQGYPGIGKPGMPGMPGKPGAMGSPGSRGEMGPK
GESGSMGIPGPQGPPGPQGLPGIGKPGDRGLPGQPGTKGEPGMKGQPGIQGAQGPKGDKG
VGIPGLPGLKGPPGLPGPPGPVGLPGIGKPGMIGFPGPQGAGGKPGIPGERGPQGLAGIP
GIQGPPGLPGIGKPGQDGIPGQSGMPGGKGEQGLPGLPGPPGAPGIGKSGFPGLKGDRGM
GGAPGPLGPKGEKGHVGPPGMAGPPGEPGQPGQPGLMGPSGVMGFPGPKGEFGAVGPPGP
IGPKGELGLQGFPGKPGFPGEVGPPGLRGLPGPIGPKGEAGHKGLPGLPGAHGLMGPKGE
PGKPGTQGHQGPTGIPGIAGPSGPIGPPGLPGSKGERGLPGPPGFPGMGKPGVSGMPGPP
GKPGSLGAPGQPGLQGPPGPPGPPGPPVIMQPTPPEIGQYLPEVGPGLDGIKTPYGYKGK
KSKNSAAAAAAAAAAYEMPAFTAELTTPFPQVRVPVMFDKLLYNGRQNYNPQTGVFTCEI
PGIYYFAYHIHCKGGNVWVALFKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDRVYIQ
MPSEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgatttatttgttgttgcagattatgactatattgctagcacctacatggctaatcatt
taccttgggctactgagatctatccaagctggtgcttattatgggatcaagccgatgcct
cctcaagtgccacagtaccaacccctcgggcaacaagtacctcatatgccattgggtaaa
gatggagtgccaatgcagcacatgggaaaggaggggccacacctatcatatggaaaagaa
tatatacctcagtatataaaagaaattccacagatccccatgcttggcaaggagaggatt
tcaaagaaacagaaagaattgccattagccagtttgagaggtgaacagggtcctcctgga
gagcctggagcaagagggcctccaggatctccagggttgccaggacatggagtaccagga
gctaaaggaaaaccaggaccccaaggatacccaggaattggaaaaccaggcatgcctgga
atgccaggaaaaccaggagcaatggggtctccaggatcaagaggtgaaatggggccaaag
ggggagagtggatctatgggaattccaggaccccaaggaccaccaggacctcaaggactg
cctggaataggaaaaccaggcgacagaggattaccaggacaaccaggaacaaagggcgag
ccaggaatgaaagggcaacctgggatacaaggcgcccaaggcccaaaaggagataaaggt
gtggggattccagggttaccagggctaaaagggccacctggtttaccaggtcctcccggt
cctgttggacttcctggaataggcaaaccaggaatgatagggtttccaggccctcaggga
gctggaggcaagccaggaattccaggggaacgagggccacagggcttagctgggattcct
ggaattcaaggtcctcctggtcttccaggtatagggaagccaggacaagatggaatccca
ggacagtcaggtatgccaggtgggaagggggaacaaggcctgccaggtttaccaggacca
cctggtgctcctgggattggaaaatcaggtttccctggtcttaaaggtgatcgaggcatg
ggtggtgctccaggcccactgggacctaagggtgaaaaaggtcacgtgggaccacctggc
atggctgggcctccaggggaaccaggccaaccaggccagcctggattaatggggccctca
ggtgtgatgggattcccaggtccaaaaggagaatttggagctgttgggcctccaggacct
attggtcccaaaggtgagcttggtttgcaaggtttcccaggtaaacctggttttccagga
gaggtgggcccaccaggtctgagaggcttgcctggtccaattggaccaaaaggagaagct
ggtcacaaaggtttgccaggtttgcctggtgctcatgggctgatgggccccaagggagaa
cctggaaagccaggaactcaaggccatcaaggccctactggaatcccaggtattgcagga
ccaagtggtccaattggacctcctggactacctggaagtaaaggtgaacggggtttgcca
ggcccaccaggttttccaggaatggggaaacctggtgtttcagggatgcctggaccacca
gggaaacctggatcacttggtgctcctggccagccaggtctccaaggccctcctggtccc
cctggccctcctggccctccagtaataatgcaacctacgccgccagaaataggacagtat
ttgccagaggtaggaccaggccttgatggaataaagactccatatggttataaggggaag
aaaagcaaaaacagtgccgctgctgccgccgccgccgccgctgcctatgagatgccggct
ttcacggctgagctcaccactccttttccacaggtcagggttcctgtgatgtttgacaag
ctcctttataatggcaggcagaattataatccacagactggtgtctttacctgtgaaatc
cctgggatctactacttcgcttaccacatacactgcaaagggggaaatgtctgggtggca
ttatttaaaaacaatgagccgttgatgtacacgtatgatgaatacaagaaaggtttcctg
gaccaagcttctggaagtgccgttgttcagctgatgcacggcgacagagtttatatccag
atgccatctgaacaggcggcgggactttatgccgggcaatatgttcactcatctttttct
ggatatttattgtatccaatgtaa
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