Pantherophis guttatus (corn snake): 117662793
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Entry
117662793 CDS
T07329
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117662793 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117662793 (SMARCD1)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117662793 (SMARCD1)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117662793 (SMARCD1)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117662793 (SMARCD1)
PBAF complex
117662793 (SMARCD1)
GBAF(ncBAF) complex
117662793 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
117662793
NCBI-ProteinID:
XP_034268315
UniProt:
A0A6P9BJZ2
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MAARAGFQAVAPSGGGSGAGPGAGPLGPGTPGPPVRMGPAPGQGMYRSPLPGAAYPRPGM
LPASRMTPQGPAMGPPGYGGSPSVRPGMAQSGMDQSRKRPAPQQIQQVQQQSVQNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKAMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggtttccaggctgtagctccgagcggtggcggcagtggagccggc
cctggggcgggaccgctaggaccagggacgccggggcctcccgtgcggatgggcccggct
cccggacaaggaatgtaccgctcccctctgcccggcgctgcatacccgcgcccgggaatg
ttgcctgctagccgcatgactcctcaaggacctgcaatgggacctccaggctatggtggg
agcccttctgtccgacctgggatggctcagtcaggaatggaccagtctcgcaaaaggcca
gctcctcagcagattcagcaggttcagcaacagtcagtgcaaaaccgaaatcacaatgcc
aagaaaaaaaagatggcagacaaaattctacctcagcggatccgggaattagtacccgag
tctcaggcatacatggatttgttggcatttgagaggaagctggaccagactattatgcgg
aaacgattggatattcaggaggctttgaaaaggccaattaagcaaaaaagaaaactacgc
atttttatctccaatacctttaatccagccaagtcagatgcagaagatggagaaggcacc
gtagcctcatgggaactccgagtggaaggacgactattggaagattctgctctctctaag
tatgatgctaccaagcagaagagaaagttctcatccttttttaaatctctggtgattgag
ctggacaaagatctctatggcccagataatcacttggtggagtggcataggactgctaca
acccaagagaccgatgggttccaggtgaaaaggcctggtgatgtgaatgtgcgctgcact
gtcctcctgatgttagactaccagcctccacagttcaaactagacccacgtttggctcgc
ctcttgggaattcacacccagacccgcccagtgatcatccaagctctgtggcaatacatc
aagactcacaagctgcaggacccccatgagcgggagtatgtcatctgtgataagtacctc
cagcagatattcgagtctcagcgaatgaagttctcagagatcccacagcggcttcatgca
ttgcttatgcctccagagcccattatcattaaccatgtcatcagtgttgatccaaacgat
cagaagaaaactgcttgctatgacattgatgtagaagtagatgatactttgaaaacccaa
atgaattctttcctgctttctacagccagccagcaagagatagctgcactggataacaag
atccatgagaccatagaaaccattaaccagttaaagacccagcgtgaatttatgctgagc
tttgccagagatccccagggtttcatcaatgactggctgcagtcccagtgtcgagacctg
aaggctatgacggatgtcgttgggaacccagaagaagaacgccgagctgaattttacttc
cagccctgggcccaagaggctgtatgcagatatttctactctaaggttcagcagagaagg
caagaacttgaacaagctctgggaatccgcaatacctaa
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