KEGG   Pantherophis guttatus (corn snake): 117663041
Entry
117663041         CDS       T07329                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
pgut  Pantherophis guttatus (corn snake)
Pathway
pgut03013  Nucleocytoplasmic transport
pgut03015  mRNA surveillance pathway
pgut03040  Spliceosome
pgut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pgut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117663041 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    117663041 (ALYREF)
   03015 mRNA surveillance pathway
    117663041 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117663041 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgut03019]
    117663041 (ALYREF)
   03041 Spliceosome [BR:pgut03041]
    117663041 (ALYREF)
Messenger RNA biogenesis [BR:pgut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117663041 (ALYREF)
    TREX complex
     117663041 (ALYREF)
Spliceosome [BR:pgut03041]
 Complex C
  Other components
   EJC/TREX
    117663041 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117663041 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 117663041
NCBI-ProteinID: XP_034268777
UniProt: A0A6P9BBY9
LinkDB
Position
Unknown
AA seq 255 aa
MGDKMDMSLDDIIKLNRSQRGGGGRAGGGRGRGRGATGRGGGGGAGRGGAGRAGGGGPVR
NRAALSRGGGRNRPAPYSRPKQLPEKWQHDLFESCFGPGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNCVPLDGRPMNIQL
VTSQIDTQRRPIQSVSRGGMTRNRGGSGGFGGGNRRGSRGNRGRGRGAGRSSKQQLSAEE
LDAQLDAYNARMDTS
NT seq 768 nt   +upstreamnt  +downstreamnt
atgggcgacaaaatggatatgtctttggacgacattatcaagctgaacaggagtcagcga
ggcggaggtggccgagccggcggtggtcgaggccggggaagaggagctacaggtcgagga
ggaggaggaggagctgggcgaggaggagctggacgcgcaggtggaggcggacccgtccgg
aacagagccgctctgtcccggggaggcggcaggaacaggcccgcgccctacagccggcca
aaacaactccctgaaaagtggcaacatgatttgttcgagagttgctttggccctggcgct
ggcgtggaaacgggtggaaagctcctcgtctctaatctggattttggtgtttcggatgca
gacatacaggagctttttgcagaatttgggacactaaagaaggcagcagtacactatgat
cgttctggacgtagtctaggtactgcagatgttcattttgagaggaaggctgatgctctg
aaggctatgaagcaatacaattgcgttcccttggatggacgtcccatgaacattcagctg
gttacatcacagatagatacacagaggagaccaatacagagtgtaagtagaggcggtatg
acaagaaaccgtggtggctcaggtggttttggcggtggcaaccgacgaggcagtcgtggc
aatagaggcagaggcagaggtgctggtaggagttccaaacagcagctctctgcagaagaa
ttggatgcacaattggatgcttataatgctaggatggataccagttaa

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