Pantherophis guttatus (corn snake): 117663290
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Entry
117663290 CDS
T07329
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03082
ATP-dependent chromatin remodeling
pgut03083
Polycomb repressive complex
pgut04110
Cell cycle
pgut04330
Notch signaling pathway
pgut04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117663290 (HDAC1)
03083 Polycomb repressive complex
117663290 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117663290 (HDAC1)
04350 TGF-beta signaling pathway
117663290 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117663290 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgut03036
]
117663290 (HDAC1)
Enzymes [BR:
pgut01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117663290 (HDAC1)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
117663290 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
117663290 (HDAC1)
BRAF-HDAC complex
117663290 (HDAC1)
REST complex
117663290 (HDAC1)
SHIP complex
117663290 (HDAC1)
MiDAC complex
117663290 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
117663290 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117663290 (HDAC1)
Chromatin remodeling factors
NuRD complex
117663290 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Peptidase_C101
Motif
Other DBs
NCBI-GeneID:
117663290
NCBI-ProteinID:
XP_034269218
UniProt:
A0A6P9BED1
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPYKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHG
DGVEEAFYTTDRVMTASFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMETFQPSAVALQCGSDSLSGDRLGCFNLTIKGHAKCVEFIKSFNLPTLMLGG
GGYTIRNVARCWTYETAVALNTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVPEESGDEEEEDPDKRISIRSSDKRIACEEEF
SDSEDEGEGGRKNVANFKKAKRSKTEEEEKEEEEKKEVHEEEKRKEEPTEAKSIKEEVKS
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgactcaggggaccaagcggaaagtctgctactattacgacggggacattgga
aactattactatggtcaaggtcaccccatgaagcctcacaggatcaggatgactcacaac
cttcttctcaactatggtctttacagaaaaatggaaatttaccgaccttacaaagcaagt
gccgaggagatgaccaaatatcacagtgatgattacattaaatttctgcggtcaattcgc
ccagataacatgtccgaatacagcaagcagatgcagcgattcaatgttggagaagattgc
cctgtgtttgatggactgtttgaattctgtcaactttctacaggagggtctgttgcaagt
gcagtgaaactaaacaagcaacagacagacatcgcggtgaactgggctggaggcttgcat
catgccaagaagtcagaggcttctggcttctgttacgtcaatgatatcgtcctggctatc
ttagaattgctaaagtaccaccagagagtgttgtatgttgacatcgacatccaccatggt
gatggtgtggaggaagccttctacaccacagaccgtgtcatgacagcgtccttccataag
tatggggaatatttcccaggaactggggatctgcgggatattggtgcgggtaaaggaaaa
tattatgctgtcaactatcctctccgggatgggatcgatgatgagtcttatgaagccatt
ttcaagccggtgatgtctaaagtgatggagacgttccagccgagtgccgttgcactgcag
tgtggctcagattctttatcaggggacaggttgggttgttttaatctgaccattaaaggt
catgccaaatgtgtggagttcatcaaaagctttaatttgcccacgctgatgctgggaggt
ggcggctacacgatccgtaatgtggcccggtgttggacgtacgagacggctgtggcattg
aacacagagatcccgaatgagcttccttacaatgattactttgaatactttggcccggat
ttcaaactccacatcagcccttccaacatgaccaaccaaaacaccaacgaatacctggaa
aagataaagcaacgtctctttgagaacctgaggatgctcccccatgcccctggtgtgcag
atgcagccaattccagaggatgccgtgccggaagagagtggcgatgaagaggaggaagat
cctgacaaacggatttccatccgctcttcggacaagagaatcgcctgcgaggaggaattc
tcggactcggaggacgaaggggaagggggtcgcaaaaacgttgccaatttcaagaaggct
aaacggtcaaaaacagaagaagaggagaaggaggaggaggagaagaaagaagtacacgag
gaagagaagagaaaagaagaacccacagaggccaaaagcataaaggaagaggtgaaatcc
acctaa
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integrated database retrieval system
