Pantherophis guttatus (corn snake): 117663409
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Entry
117663409 CDS
T07329
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117663409 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgut03000
]
117663409 (ARID1A)
03021 Transcription machinery [BR:
pgut03021
]
117663409 (ARID1A)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117663409 (ARID1A)
Transcription factors [BR:
pgut03000
]
Eukaryotic type
Helix-turn-helix
ARID
117663409 (ARID1A)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117663409 (ARID1A)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117663409 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
117663409
NCBI-ProteinID:
XP_034269448
UniProt:
A0A6P9BF73
LinkDB
All DBs
Position
Unknown
AA seq
2269 aa
AA seq
DB search
MAAQVAPAAAASSLGAPAPSELKKAEAQQRDCSSEEAGGEAAERGGEKQSESEGPPGKEL
QDGAESNGGGAGAEPDLKSPNGNPGPRPVATLNNNLPEPPGSGSGGSSNSSDGVGTPQPQ
QQQQQPPPPTHPAALAPPAYGFGQPYGRGAQAAAAVVAAAAFHQHGGQQSPGMAALQSGG
LEQPYSGPAGPPQGPPPPQNSHGVGSAEHGFPNHQYNNYYPAAGRSAGAYPPPPQAYALS
SPRGNAQSPAQAGAKPPASVFQQQRFGAMGPSAGGAGGGSIGGPSPQPTSTPTLNQLLTS
PSSTRGYQGYPGADYGSGPQDGGATAKAPAAPDIASQYSGGTGQGWAAAGPGSQQRSHHA
PMSPGSSSAAGGQSLARSQQPSSPMDQMGKMRPQPYGGNNLYTQQQGPQSGQQQGHGYPG
QPYGPQTPQRYPVGTLSRTQTAMGTVSYAQQIPPYGQQGPTGYGQQSQTPYYNQQSPHPQ
QQPSYAQQPPTQAPHAQPSYQQTQTQSQPPQLQSSQPPYSQPQPQPSHQQSPSPYPQQPT
PGQQQHPQGQTPYSQQQSQSPYQQQQQQAQQSATSALAQPSATYPPSQSQQPAAYSQQRF
PPPQELSQDSFGSHGSSATSMASSKGQEDVTLNLQSRPSSLPDLSGSIDDLPMGTEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA
VPGNQMPPRPPSGQSDSLLHSSINQSTIAPDRGYIQRNPQIPQYNSPQPGSALSPRQSSG
GQMHTGIGPYQQNSMGAYGPQGGQYGPQGGYPRQPNYNAMPNANYPSPGMGGTMNPMGGG
NQIHGQTGIPPYPGLPPGRGLSHAAMGNRPYGPNMTAMPPQVGSGMCPPPGGRKAQEAAA
AAMHAAAVNSIQNRPSGYPHINQGGMMGTGPPYGQGINSMAGMLNPQGPPYQMGGNMANN
SAGMAASPEMMGLGDVKLTPAAKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGE
PERKMWVDRYLAFAEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELA
TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDNKKSQTKIQPPSPAGS
GSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMAPLQGIRSNSVGLQDAFPDGSDPTF
QKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGTMRKGSDPFMSSGQGPNSGMGDPYN
RATGPGMSNMAMGPRQHYPYSHFERVRTEAGMGPEASLGTGTPQPNILPSTPDSGMYSPS
RYSQQPQQRHDSFSNHFPTQGTSSGSPFPSQQSTLYQPQQQNYKRTMDGNYGPPAKRHEG
EIYNVPYSTGQGQAQQQLPPAQTQQTSQPQTAQPSPQQEMYNQYAGNTYSAADRRPAAGP
QNQFPFQFGRERVSAPPGSSTQQSMPPQMIGGPIQSTPEGPQQGTMWQGRNDMGYSYPNR
QSTGSAPQGSAYHGVNRTEEMLHPDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQPN
YQAQPSMQNHIPQVSSPAPLPRPVENRTSPSKSPFLHSGMKMQKAGPPVPASHVTPAAVQ
PPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTI
NILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPEKCC
QSSNSPEGVEKEEPQNSNCEVEEEEEEGEEEAAFANKVSAPLESNEEKLVSKFDKLPVKI
VQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKLELLLTHKRASCNS
VLRKRSAAEGNPVTREGESSAPDGPPEKRITATMDDMLSARPGSLAEEEEVKTVEVTKES
SKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLSKRCVCVSNIIRSLSFVPG
NDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEML
RENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQR
LVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQ
GDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFEPTSVDMMRRAAR
ALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccgccgccgccagcagcttgggtgccccggctccgtcc
gagctgaagaaagcggaggcgcagcagcgggattgttcgtcggaggaggcggggggcgag
gcggcggagcgcggcggcgagaagcagtcggaaagtgaaggtcccccgggaaaggaactg
caggacggggccgagagcaatggcgggggcgctggggccgagcccgacctgaagagcccc
aacgggaacccgggccctaggcccgtcgccaccctgaacaataacctcccggagccgccc
ggtagtggtagcggcggcagtagcaacagcagcgacggggtggggacgccgcagccacag
cagcagcagcagcaaccgccgcccccgactcatccggccgccttagccccgccagcctac
gggttcgggcaaccctacggtcgaggcgcccaggcggctgcggccgtcgtcgcggccgct
gctttccaccaacatggcggacaacaaagccctggcatggcagcgctgcagagcggaggc
ctggagcagccgtactcggggcccgcggggcccccccaggggccgccccctccccagaac
tcgcatggcgtcggcagcgcggagcacggcttccccaaccaccagtacaacaactactac
cccgccgccggacgcagcgccggcgcctacccgcctccccctcaggcctacgccctgagc
tccccccggggaaacgctcaaagccccgctcaagccggggcgaaaccgccggcttcggtt
ttccagcagcagcggttcggggccatggggccctcggccggcggcgcaggaggcggcagc
atcgggggcccttccccgcaacccacgtcgacccccaccctcaaccagctgctcacttcc
cctagctcgactaggggttatcaagggtacccaggggccgattacggcagcggcccccag
gacggcggagcgacggccaaggccccggccgcaccggacattgcttctcaatacagcggg
ggcaccggccagggctgggcggcagccggcccgggaagccaacaaaggagccaccacgcg
cccatgagccccgggagcagcagcgccgccgggggacagtcgctcgccaggagccaacag
ccatccagtccaatggatcagatggggaagatgagacctcagccttatggaggaaacaac
ctatacacacaacagcagggacctcagtcagggcagcaacaaggccatggatacccagga
cagccatatgggccacagactccccagagatatccagtgggaactctaagcaggacgcaa
actgcaatgggcaccgtctcttatgcacagcagataccgccttatggacagcagggccct
actggatacgggcagcagagtcagaccccttattacaaccagcagagtccgcacccccag
caacagccttcttatgcccagcagccccccactcaggccccacatgctcagccctcttat
cagcaaacgcaaactcagtctcagcctcctcagcttcagtcatcccagcccccctattcc
cagccacagccacaaccatcccaccagcagtccccatctccatatccccagcagccaacc
ccaggccagcagcaacacccccagggtcagactccctactctcagcagcagtcccagtcc
ccttaccagcagcagcagcagcaagctcagcagtctgctacctcggcgctcgcccagcca
tcggcaacataccctccgtctcagtcacagcagccggcggcgtattctcagcagcgcttc
ccacctccacaggagttgtcacaggactcatttggctcccatgggtcgtctgccacgtca
atggcttccagtaaagggcaagaagatgtgactttgaatctgcagtcaagaccctctagc
ttaccggatctctctggttcaatagatgacttgcctatgggtaccgaaggagcactaagt
cctggcgtaagcacatcagggatttccagcagtcaaggagagcagagtaacccagctcag
tctcctttctctccacatacctctccgcacttgccaggcattcgaggaccttccccatca
cctgttgggtcaccggctagtgttgctcagtcccgctctggtccactttctcctgctgca
gtgccaggcaaccaaatgccacctcgaccaccgagtggccaatcagatagcctcttgcat
tcctccattaatcagtcaaccatagctccagatagaggttatatacagaggaatccacag
attccccagtataattctcctcagcctggatctgccttatctccacgtcagtcttctgga
ggacagatgcacactgggattggaccataccaacaaaattctatgggcgcttatgggcct
cagggcggtcaatacgggccccaaggtggttatcccaggcagccaaactacaatgcgatg
cccaatgcaaattaccccagcccaggaatgggaggcaccatgaacccaatgggaggaggg
aatcagatccatggtcagaccggtataccaccctaccctggacttccaccagggagagga
ctgagccatgctgccatgggcaataggccttatggacccaacatgaccgccatgcctccc
caagtaggaagtgggatgtgtcctccaccaggtggtaggaaagcacaagaagccgctgct
gctgctatgcatgctgctgctgtcaactcaatccagaataggccatctggttaccctcac
attaaccaaggaggaatgatgggaactggtcctccttatggccaaggaattaatagcatg
gctggcatgctgaacccccagggtccgccatatcaaatgggtgggaatatggccaacaat
tctgcagggatggctgcaagtcctgaaatgatgggacttggagatgttaaattaacccct
gcagctaaaatgaacaataaagcagatggaacaccaaaagctgaatccaagtcaaagaaa
tccagttcctccaccactacaaacgaaaagattactaaattatatgagctgggtggtgag
ccagagagaaagatgtgggtagatcgttatttagccttcgctgaagagaaagcaatggga
atgaccaatcttccagcagttggaaggaaacctttagacctgtatcgactctacatttct
gtgaaggaaattggagggctgactcaggtgaacaagaacaagaaatggcgggagttagct
accaatttgaatgtgggcacctctagcagtgcagcgagctctctgaagaagcagtatatc
cagtgtctctatgctttcgagtgcaagattgaacgaggtgaagacccgcccccagacatc
tttgcaacggataacaagaaatcacagaccaaaatacagcctccatctccagcgggttca
ggctccatgcaaggtcctcagacacctcagtccactagcagctccatggccgaaggagga
gatttgaagcccccaactcctgcatctacaccgcatagtcagatggcacctttgcaaggc
atcaggagtaactcagtaggccttcaggatgcctttcccgacggcagtgaccctactttc
cagaagaggaactccatgactccaaatccagggtaccagcccagcatgaatacttccgac
atgatgggtcgcatgtcctatgagccaaataaggatccatatggcactatgagaaaagga
agtgatccttttatgtcctcaggacaaggtcccaacagtggtatgggagatccttataat
cgtgctacaggtccaggaatgagtaatatggctatgggaccgaggcagcattatccatac
agccattttgaaagagtgagaaccgaagcaggtatgggacctgaagccagcttgggaact
ggaacaccccagcccaacatcttgccttccactccggattcaggaatgtattctccaagc
cgctattctcaacagccacagcaacggcatgattcctttagcaatcatttccctactcaa
ggtacatcctctggcagtccctttcctagccaacagtccaccttatatcagccacagcag
cagaactacaagagaacaatggatggcaactatggtccaccagccaaaagacatgaagga
gagatatacaacgtaccatatagcacaggccaaggacaagcccagcaacagctccctcca
gcacaaacacaacaaacaagccagccccaaacagctcaaccttcccctcagcaggaaatg
tataaccagtatgctgggaatacatactctgctgcagatcgccggcctgctgctgggcct
cagaaccagttcccattccagtttggcagagagagggtctctgctccccctggttccagt
acgcagcaaagcatgcctcctcagatgataggtggcccaatacagtccactccggaaggc
ccacaacagggcaccatgtggcaagggcgtaacgatatgggttacagctatccaaatcgg
cagagcactggctctgcgccccaggggtctgcctatcatggagtgaatcgaaccgaagaa
atgctacatccagatcagagagttaaccacgagggaccgtggccttctcatggcaaccgc
cagcctccttatggtccttctgcccccgtgcccccaatgacaaggccgccccagcctaac
taccaggcccaacccagcatgcagaatcacattcctcaggtatctagtccagcacctctt
cccaggccggtagaaaaccgcacctctccaagtaaatctccattcctgcattcgggaatg
aagatgcagaaggcagggcctcctgttccagcctcacacgtaacaccagcagctgtccaa
cctcccatgatacgacgcgacatcactttcccacctggctcagtggaagctacacaacca
gtgctgaagcagaggcggcgcctgaccatgaaagatatcggaactcctgaagcatggaga
gtgatgatgtctctaaagtctgggttactggctgaaagtacgtgggccttagataccata
aacatcctactctatgatgacaacagcataatgaccttcaacctcagccagctgccagga
ttgttggaactattggtggaatatttccgacgttgcctcattgaaatctttggaatcctg
aaggaatatgaagtgggtgatccagggcaaaggactctgttggatcctgaaaagtgttgc
caatcttcaaattctcctgaaggagtggagaaagaagagccacagaattctaactgcgag
gtggaggaagaggaggaggaaggggaggaagaggctgcctttgcaaataaagtctcggcg
cctctagaaagcaacgaggagaagctagtcagtaaatttgataaacttccagtcaagata
gtgcagaagaacgatccatttgtggtagattattcagataagcttggtcgggtacaggag
tttgagagtggactgttgcactggcggattggtgggggagacaccactgaacacatccag
acccactttgaaagcaaattggagttattgctgactcacaaacgagcttcctgcaactct
gttctgagaaaacgctctgcagctgagggcaaccctgtcacccgggagggagagtcctct
gcacctgatggtcctcccgagaaaaggataacagctactatggatgacatgctttcagcc
cgaccaggctccttggcagaagaagaggaagtcaaaactgtggaggtaacaaaggaaagc
agcaaatttccatttggcattagtccagctcagagccacaggaatattaaaatcttggag
gacgaacctcacagtaaagacgaaacgcccctctgcacgcttctggactggcaggactcg
ctgtctaaacgctgcgtctgtgtatctaacatcatcaggagtttgtcgtttgtgccaggc
aatgactttgagatgtcaaaacatcctggtctgctgttgatcctagggaaactgattctc
ttgcaccataagcacccagaacgtaaacaggcacccctgacgtacgagaaggaagaggag
caggaccaaggagtgagctgcaacaaagtggagtggtggtgggactgcctggagatgctg
cgtgaaaacactttggtcacactggccaacatctctggccagttggacctttctccctat
ccagagagcatctgtttgcctgtactggatggacttcttcattgggcagtgtgtccttca
gcagaagcccaagacccttttccaacccttgggcctaatgctgtcctctcccctcagaga
ctggttttggaaaccctcagcaaactcagcatccaggacaacaatgtggatttgatcctt
gcaacgccaccttttagtcgcttggagaaactctacagcaccatggtgcgctttcttagt
gaccgaaagaatcccgtatgtcgggagatggctgtggtactactggccaatttggcacag
ggtgacagcttggcagctagagccattgccgtgcagaagggcagcattggcaatttgttg
ggctttttggaggatagcctggcagctactcagttccagcagagccaagccagcttgatg
cacatgcagaaccctccctttgagccgaccagtgtggacatgatgcgtcgggcagctcgg
gcgctgctcgccctggccaaagtggacgagaaccactcggagttcacgttatacgaatca
cggctgttggacatctccgtgtcacctctgatgaactcattggtttcacaagttatttgt
gatgtactgtttttaattggccaatcatga
DBGET
integrated database retrieval system
