Pantherophis guttatus (corn snake): 117663824
Help
Entry
117663824 CDS
T07329
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgut03041
]
117663824 (DDX20)
Enzymes [BR:
pgut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117663824 (DDX20)
Spliceosome [BR:
pgut03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117663824 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SiaC
AAA_19
DUF4715
AAA_30
Motif
Other DBs
NCBI-GeneID:
117663824
NCBI-ProteinID:
XP_034270195
UniProt:
A0A6P9BR40
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MDAQDAVPSMAESWMRTRDVLLPEGPEDFGSLLLSAPVLEGLKAAGFIRPSPVQLKAIPL
GRCGLDLIVQAKSGTGKTCVFSTIALDSLILENSVTQILVLAPTREIAVQIHAVITTIGI
KMEGLECHVFIGGTPVNQDKMRLKKCHIAVGSPGRIKQLIDLDYLNTSSIRLFILDEADK
LLEEGSFQEQVNWIYSSLPANKQMLAVSATYPESLANTLAKYMREPTFVKLNSTDPSLLG
LKQYYKVVNSYPLPHKTFEEKAEHLQELFRKIPFNQALVFSNLHSRAQHLADLLSSKGFP
AECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMH
RIGRAGRFGTLGLAVTYCCRGEEENMMMKIAQKCNLQLLSLPETLPPELLEHFEGGHVEV
TAVPYPNASPHSCLLPTKRPEGTRQPPIISASTEMIVCDSSPVAKPKQVFKQKKLLKNRT
EHAKTTMNRNKHDNIPLEKHQVESDSEIAVHNNEQVDKESLKNMLPKIPCLSSFKNQDSV
CLWSMVDFIEDYEYFIKEGLERDVEIIRTYVNPRNQDKQLDSLDLVGMESSKYVEATTGT
LAAESDDNDSSCSSESSICSQENQSCIKTSSDMQQRDNSILSTDQTHPQQFSPVLKQKQD
TFLVQKKMKGNVKQSKQIKRDHYHSIHPIKTEFIEEASQSKSAPFPHNENLNPDEYWRGY
YRAWRKHYIEASRLYYQKYQRPLNMLTAYHANAIYLEELLKKDR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcaggatgcggttccttcgatggcggagtcctggatgcgtactcgggatgtc
cttctcccggaagggcctgaagatttcggatcgctgcttctttcagctccggttctggaa
gggttgaaagcggcgggctttataaggccttctccggtgcagctcaaagctattccgcta
ggccgttgcggtttagatcttattgtgcaggcaaaatcaggcacaggtaaaacctgtgtg
ttttctactattgcacttgactcgcttatcttggaaaactcagtaactcagattttagtc
ttggcacctacccgagagattgctgtgcagatacatgcagtaattacaactattgggatc
aaaatggaaggtttggaatgtcatgtcttcattggaggaactcctgtaaatcaagataaa
atgagacttaaaaagtgtcacatagctgtaggctcccctggtcgcattaaacaacttata
gatctggactatttgaatacatccagcattcgtcttttcattcttgatgaagcagacaag
cttctggaagaaggcagcttccaggaacaagtaaattggatttattcttctctaccagcc
aataagcagatgttggcagtttcagccacctatcctgaatccttagctaatactttggct
aaatacatgagagaacccacttttgtgaagctgaattctactgacccaagtctccttgga
ttgaagcagtactacaaagttgtgaattcttacccattacctcataagacctttgaggag
aaggctgagcatttacaggagctcttcaggaaaataccgttcaaccaggccttggttttc
tcaaatctacatagccgagctcaacacttggctgatttattgtcatctaaaggttttcct
gctgaatgtatttcaggcagtatgaatcagaaccagcgacttgatgccatggctaagctg
aagcagtttcattgcagagtgttaatttcgacagatttgacttcccgtggaattgatgct
gagaaggtgaatctggttgttaacttagatgtgcctttggattgggaaacatatatgcat
cggattggtagagctggacgctttggaactttaggattagctgtgacatattgctgtcgt
ggagaggaagaaaatatgatgatgaaaattgcacaaaaatgtaatcttcagcttctttct
ttaccagaaactttgccaccagagctgctggaacattttgaaggagggcatgtagaagtc
actgctgtcccatatcccaatgcatctcctcattcatgtctgttgccaactaaaaggcca
gaagggacaaggcaacccccaataataagtgctagcacagagatgattgtttgtgacagt
tctccagtagccaagccaaaacaagttttcaaacaaaagaagcttcttaaaaatagaaca
gagcatgctaaaacaacaatgaatagaaataaacatgataatatcccactggaaaaacac
caagtggaatctgatagtgaaattgctgtgcacaataacgaacaggtggacaaagaaagt
ttaaagaacatgcttcctaaaatcccttgcctgtcttcttttaagaaccaggattctgtc
tgcttatggagcatggttgattttattgaggattatgaatatttcattaaggaaggattg
gagagagatgtagagattataagaacttacgtaaatcccagaaaccaagataaacagtta
gattctttagatttagtaggaatggaatccagtaaatacgtggaagcaacaactgggaca
ttggctgcggaatctgatgataatgacagttcttgtagttctgaatcatccatatgtagc
caagagaatcaatcttgcatcaagacctcttcagatatgcagcaaagagataatagtata
ctgtcaacagaccagacacatcctcagcaattcagtcctgtccttaaacaaaagcaagac
acttttctggtccaaaagaagatgaaagggaatgtgaaacaaagtaaacagatcaagcgt
gaccactatcactccattcaccccatcaagactgaatttatagaagaggcatcccaaagc
aaaagtgctccttttcctcacaatgaaaatttaaatcctgatgaatattggagaggatat
taccgggcatggcggaagcattatattgaagcttctcgtttatactaccaaaaataccag
agaccattaaacatgctgactgcatatcatgccaatgcaatctacctggaagagttgtta
aagaaagatagataa
DBGET
integrated database retrieval system
