Pantherophis guttatus (corn snake): 117664255
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Entry
117664255 CDS
T07329
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117664255 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117664255 (NDC1)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117664255 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
SoxE_N
Motif
Other DBs
NCBI-GeneID:
117664255
NCBI-ProteinID:
XP_034271006
UniProt:
A0A6P9BSW6
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MGDVSTREQLSILRWRAAASIAWSVLLLPLCVAVFISITSIDLFHPVQWITDSFNDLYTS
YVIFCLLLLSAVILVINVFNVQFHAVVPSIHCSRLALISKIIHPQQVIHSIAHAVMGMLV
AWCAAVMTKGKFLFLSMPCTATTTESAADATLHTCLNEYHLFLLLLGAFMGYSYSLRYLV
NNLNYLPFPAIQQYKYLRFRRSLPLLAKHSCVESFYMVRNFCAAYYFFGYIPRTWIITTM
NLRTDSNFPLLDTVAGLLDLSLLYHSWLCGLFLLMTWYIAWLLFRIFSTEAHHFPIQPTF
AEEADQCLPKILNSNPPPLLKFLALQDLMFLSQYSSVRRQEVFSLSQPGGHPYNWTSICG
ECLNLLSDLTQKLIIQQEIAAANGRLKQPSAGDLTQSFSSPAPEESSFQTPRTSIFPRAH
MHSLVKSSLLPLKTSPASDLGSNLGSPFNTSLLGHKPGLLELNSPWHGSVQSPHIMRRGP
KLWTSSSDLQLAGYPDEPHPVMVVAKDAKEAAETGSFYMWLQNKKEQIKNFLSKRVLIMY
FFNKHPEASIQALFSDTQMHIWALEGLSHLVAASFTEDRYGVVQTTLPAILSTLLTLQEV
MDKHFKLPHVSSKPPKTSGNLADTSYKTLRFALRSSLKTAIYRITTTFGEHLNAVQVSSE
HKKRLQQFLEFKE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgtttcaacgcgggaacagctcagtatcttaagatggagagcagcagcaagc
attgcttggtctgtgctattgcttcctctgtgtgtggcagtgttcatcagcattaccagt
attgacctcttccatcctgttcagtggatcacagattctttcaatgatttgtatacatcc
tatgtgatcttttgcctactactgctgtctgcggtgatactggtaataaatgtcttcaat
gttcagtttcacgcagttgtaccttctattcactgctcccgattagccctaataagcaag
attatccacccgcagcaggtgatccattcaattgcccatgctgtgatgggaatgctggtg
gcttggtgtgctgcagttatgaccaaggggaagttcctctttttgtccatgccctgcaca
gctaccactacagaaagtgctgctgatgctacccttcacacatgcctgaatgaatatcat
ctcttccttttactccttggagcttttatgggttacagttacagtctccgatatcttgtc
aacaatttgaactacctcccatttcctgccatacaacaatacaagtatctgcgcttcaga
agatctcttccactgttggccaaacatagttgtgtggagtcgttttatatggttaggaac
ttctgtgctgcttattacttctttggttatattccaaggacatggataattaccacaatg
aaccttcgtacagatagcaattttcctcttctggacacggtggctggtctcctggatttg
tctcttctgtatcatagctggttatgtggtctgtttctactcatgacatggtacatcgca
tggcttctcttcagaattttttcaaccgaggcacatcactttcctatccaaccaactttt
gcagaagaagcagaccagtgtttacctaaaatcttaaacagcaaccccccacccctttta
aagtttttggctttacaggacctgatgtttctttcccaatattcttctgtgcgtcgtcaa
gaggtctttagcctcagccaaccaggcgggcatccatacaactggacttcaatttgcggg
gagtgtttgaacctactaagtgatctgacacaaaagctgataatccaacaagagattgca
gctgcaaatggaagattgaaacagccatctgcaggagacttgacacagtccttcagttct
ccagctcctgaagaaagctcatttcagacgccaaggaccagcatatttcctcgagcccat
atgcattccctggttaaatcgtctctgttgcccttaaaaacatcacctgcatctgatctt
ggaagcaatttaggatcaccttttaatacttcccttttgggtcataagcctggactgttg
gagttaaactctccttggcatggatctgtccaaagtccccatattatgagaagaggacca
aaactatggacatcaagttcagatctgcaattggcaggctaccccgatgaacctcaccca
gtgatggtggttgcaaaagatgctaaggaagcagcagaaacaggttctttctatatgtgg
ttacagaacaagaaagaacagatcaaaaatttcctgtcaaaacgagtcctgataatgtat
tttttcaacaagcaccctgaagcatcaatccaagccctgttttcggatacccaaatgcat
atttgggctttggaaggtttatcacatcttgtagcagcctcatttactgaagataggtat
ggtgttgttcagacgacactgccagcaattctgagtactttgctaactcttcaggaggtt
atggacaaacacttcaaacttcctcatgtttccagcaaacctcccaaaacttcaggaaat
cttgcagacacttcctacaagacccttcgatttgctttgagatcatcactaaaaactgca
atctatcggataaccaccacctttggagaacatttaaatgcagtgcaagtgtcttcagaa
cataagaaaaggctgcagcagttcttggagttcaaggaatag
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