Pantherophis guttatus (corn snake): 117664810
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Entry
117664810 CDS
T07329
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117664810 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117664810 (POLR1A)
Enzymes [BR:
pgut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117664810 (POLR1A)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117664810 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF787
RnlA-toxin_DBD
HMG_box
Motif
Other DBs
NCBI-GeneID:
117664810
NCBI-ProteinID:
XP_034272040
UniProt:
A0A6P9BWY3
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MWKGPEAEAVAPQHSRAHAASTRRGSLGACLAITWAALPEIRTVAAMAAKEVPWRRLTGL
SFGMYTDAEIRKLSVKSITNPLFLDNAGTPSPNGLYDLALGPLDNKEVCVTCLQDFNNCP
GHLGHIELPLTVYNPLFFDKLFLLMRGSCLNCCHLTCPRATIHLLLNQLKLLEIGLIQEV
HELEAILSRFLDESADAIGDEIEEVLSCHTKVMLQSNQLRDYSAHVKNVCECRSKLISQF
WKLHMTSKKCPNCKAGRSLVRKEHNSKLTVTYPTVVSQKSGKQTIVEEVATLDETQLGKR
GYMTPLTAKQHIEVLWKNEGFFLCKLFSGMAVTGDSTFNPEMFFLNKLVVPPSRYRPVNC
VGDQMFANGQTVNLQAVMKDALLIRKLLAFIAQEQSHSLQTENGDLKTMIDQPLEPLDHS
VLATIPGQTTADKLYNSWIRLQSHVNILFDSDMDKLISEKYPGVRQILEKKNGLFRKHMM
GKRVDYAARSVICPDMYIQTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNEHPG
ASMIINEDGSRTILSTTSQTQREAIAKQLLTPSTGAPKPGIKIVCRHIKNGDILLLNRQP
TLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQNELGRAEAYVLACT
DEQYLVPKDGKPLAGLIQDHMVSGTSMTTRGCFFTREQYVELVYQGLMDKKGKVKLLPPA
VIKPRCLWTGKQVVSTLLLNVIPEDHIPLNLSGKAKISEKAWTTASARRIRRSDLDSMCE
SQVLIRNGELLCGVLDKAQYGSSAYGLVHCCHEAYGGETSGKLLTALARIFTAYLQFYRG
FTMGVEDILVKYKADQKRCNIIKESTNCGIKAIRAAFNLSQTSSCEELRSKWQDAHLQKD
QRDFNMIDLKFKEEVNCCNNEINKVCMPLGLHRSFPDNNLQLMVQSGAKGSTVNTMQISC
LLGQIELEGRRPPLMASGKSLPCFQPYDFSPKSGGFVASRFLTGIKPSEFFFHCMAGREG
LVDTAVKTSRSGYLQRCIIKHLEGLIVHYDMSVRDSDGSVVQFLYGEDGLDIPKTQYLQP
KQFPFIADNHKVIQKSKHLDEVMPKMNPQQASKQFKLVKRWQAKHQHSLRRKGGFLLFSQ
EMLADMKAEISTEGIPAYGRDPAALKLLNMWYELNEKTRRKYQKRAARCPDPSLSVWRPD
IYFASVSETFENEVKTFLGEWDARNRLNYSKSELSSQRLQELLYLKWQQSLCDPGEAVGL
LAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSIPVLNIKK
AHKRVKRLKKKLSRVCLGEVLHKVNIEETLCLEGTLSKHRVYTIRFSFLPYECYQEEKCV
KPRDILHFMETRFFKMLLETIKRKSLKLASYNTVSTRKAIQKDLEAEEEIGASQDQDDNE
AETEEDRFPDNGMTEGDADATDTKRKENQEDEVDYESEDDHEMGDDDDIPDQEMTAPDEK
NLEALETQDELYSPSSSQRARSKRKGWNEMAQHRINTVLEGHDAIEKYTYDIDNELWCEV
SLKLSLTKEYFDLASLVTSLANSAVIQETKGITRCLLNETNNKNGEVVLTLQTEGINLPE
LFHYSDIFDMNKLYCNDIHAMANTYGIEAALKILEKEIKDVFAAYGIVVDPRHLSLVSDY
MCFEGVYKPLNRYGMQSNSSPLQQMTFETSYKFLKEATMLGSHDELLSPSACLVVGKVVK
GGTGLFELKQPLK
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagggaccggaagcggaagctgtagccccgcaacacagccgagcgcacgctgcg
agcacgcgacggggatccctcggagcctgtctggcgatcacctgggcggctttgcccgag
atccggacggtcgcagccatggctgcaaaggaggtgccgtggaggcgcctgaccgggttg
tcgtttgggatgtatacggatgcagagatacggaaactgagtgtaaaatctataaccaat
cctctttttcttgataatgcgggtactccatccccaaatggactatatgatttggctttg
ggtccacttgacaacaaggaagtttgtgttacttgcctgcaagacttcaacaattgtcct
ggtcatctaggtcacatagaactacccctcactgtttataatcctctcttttttgataaa
ttattccttctgatgcgaggttcctgtttgaattgttgccatctaacatgtccacgagct
acaattcatttattactaaatcagctaaagctactagaaataggattaattcaagaggtc
catgaacttgaagcaattctgagtaggtttttagatgaaagcgcagatgcaattggtgac
gaaattgaagaagtgttaagttgccacacaaaggttatgctccaaagtaatcagcttaga
gactacagtgcacatgtaaaaaatgtatgtgaatgtagaagtaaacttatctctcagttt
tggaaattacacatgacttcaaagaaatgtccaaactgcaaagcaggaagatcacttgtt
cgcaaagaacataacagcaagctcactgtaacttatcccactgtcgtatctcagaagtca
ggcaaacagacaatagtggaggaagtagcaactttagatgaaactcagctgggaaaacga
ggctacatgacacctttgactgccaaacaacacattgaagttttgtggaagaatgagggg
tttttcctttgcaaacttttctctgggatggcagtcactggtgattcaactttcaatcct
gaaatgtttttcctaaataaacttgttgtaccaccttccagatatcgtcctgtgaattgt
gttggagatcagatgtttgcaaatggccaaacagtgaatttacaagctgttatgaaggat
gccctcctcattcggaagcttctggctttcattgctcaagaacaaagtcattcattacag
acagaaaatggagatctcaagacaatgatagaccagcccttggaacctctagaccattct
gtcttggcaacaattcctgggcagactactgcagataagctttataacagttggattcgt
cttcaaagccatgttaatattttgtttgacagtgacatggataaactaatatctgaaaaa
taccctggtgtaagacagattcttgaaaaaaagaatggcctgtttcgtaaacatatgatg
ggaaagagagtggattatgctgcccggtcagtcatttgccctgacatgtacattcagaca
aatgaaattggcattcctatggtatttgctaccaaattgacctatcctcaacctgtcact
ccctggaatgtccaagaattgaggcaagcagtcataaatgggccaaatgagcaccctggg
gcttccatgattatcaatgaagatgggtctcgcacaatattgagtacaactagtcagact
cagagggaagccatagctaagcaactcttaaccccttccactggagcaccaaaaccaggg
ataaaaattgtgtgccgccatattaagaatggtgatattcttttgctgaaccgacaaccc
actcttcatagaccctctatccaagcccatcgagcaagaatcctgcctggagagaaagtt
ctgaggcttcactatgccaactgcaaagcctataatgctgattttgatggtgatgagatg
aatgctcatttccctcagaatgagctgggccgagccgaagcctatgtattggcctgtaca
gatgagcagtatctggttcctaaggatgggaaacccttggcaggattgattcaagaccat
atggtgtctggtactagcatgaccactcgaggctgtttcttcactcgagagcagtatgtt
gagctggtgtatcaaggactgatggacaaaaaaggaaaagtaaaactgctacctccagct
gttataaagccacgatgcttatggacaggaaagcaggttgtttctactttgttattaaac
gtaattccagaagatcacattccactaaatctatctgggaaagctaagatcagcgaaaaa
gcctggacaacggcatctgcccgtagaattcgtagatcggatcttgactctatgtgtgaa
tctcaggttcttattagaaatggagaattgctctgcggggtcttggataaagctcagtat
gggagctctgcctatggtttagtccactgttgccatgaggcttatgggggtgagactagt
ggaaagttgctaactgctctggctcgaatcttcactgcttacctacagttctacaggggt
tttacaatgggagttgaggatattttggtcaaatataaggcagatcagaagaggtgcaac
atcattaaggaaagtaccaactgtggtataaaggccattagagctgcatttaatctatcc
caaacctcatcctgtgaagaacttcgaagtaaatggcaggatgcccatcttcagaaagat
cagagagattttaacatgattgatttaaagttcaaagaagaagtcaactgttgcaacaat
gagatcaacaaggtgtgcatgcctcttgggcttcaccgaagtttcccagataataatttg
cagttgatggtacaatcaggagccaaaggctctactgtgaatactatgcagatttcttgc
ttgttgggccagattgaattagaaggtcgaaggcctcctttgatggcatctggaaaatca
ttgccatgtttccagccttacgacttttcccccaaatcaggaggatttgtagctagtaga
tttcttactggcatcaagccttcagaattcttcttccattgtatggctggtagggaaggt
ctggtggatactgcagttaaaaccagccgatcaggataccttcaaaggtgtatcataaaa
catttagaagggctgattgttcattatgacatgtctgtacgagatagtgatggcagtgtg
gttcagtttctgtatggagaagatggactggatatccctaagacacagtacttgcaaccc
aagcaatttcctttcattgcagataatcacaaggtgatacagaaatctaagcatttagat
gaagttatgccaaaaatgaatcctcaacaagcatctaagcagtttaaattagtcaaaaga
tggcaagcaaagcatcaacattctttgagaaggaaaggaggctttttgctgttttcccaa
gaaatgttggctgatatgaaagctgagatctctacagaaggaatacctgcatatggccga
gatcctgcagctcttaagctgttaaatatgtggtatgaactgaatgaaaaaactcgcaga
aagtatcagaagagggcagcaaggtgtcctgatcctagcctttcagtctggcggccagat
atttattttgcatcagtgtctgaaacatttgaaaatgaagttaagactttccttggagag
tgggatgctcggaataggcttaactatagcaaatctgaactttcttcacagagattacag
gagctgctctatttaaaatggcaacaatcactctgtgaccctggagaagctgtaggactt
ctggctgctcagagtattggggaaccctccacccagatgaccctgaatacctttcacttt
gctggaaggggtgaaatgaatgttactcttggtatcccaaggttgcgggagattctgatg
gtagctagtgctaatatcaaaactcccatgatgagcattcctgtccttaatatcaagaaa
gctcacaaaagggtgaaaaggctcaagaagaagcttagcagagtgtgcctaggtgaggtg
ttacacaaagtgaatattgaagaaactttgtgtttggaagggacgttgagcaagcatcgt
gtctacaccatcagatttagttttctgccttatgaatgctatcaagaagaaaaatgtgtg
aagccaagggacatcttacattttatggagacaagattctttaaaatgttgctggaaaca
attaaaaggaagagtttaaagttggcatcttataacactgtcagcactcgaaaagcaatt
cagaaagatttagaagctgaggaagaaattggtgcttcacaagatcaggatgacaatgaa
gctgaaactgaagaagacagatttcctgataatggaatgactgaaggtgatgctgatgct
acagatacaaaaagaaaagaaaatcaagaagatgaggttgattatgagagtgaggatgat
catgaaatgggtgatgatgacgatattccagatcaggaaatgactgcaccagatgaaaaa
aatcttgaggcactggaaactcaggatgagctttattctccttcctctagtcaaagagct
cgaagcaagagaaagggatggaatgaaatggcacagcatagaattaacactgtactggaa
ggccatgatgctatagaaaaatacacatatgacattgataatgaactgtggtgtgaggtt
tcactaaagctttcactgacaaaggagtactttgatcttgcatcacttgtgacatctctg
gcaaatagcgctgtcatccaggaaacaaagggaataacacgatgtctcttaaatgaaacc
aacaacaagaatggagaagtggtgctcactttgcaaacagaagggataaatcttcctgag
ctcttccactattctgatatttttgatatgaataaactttattgcaatgatatccatgca
atggctaacacctatgggattgaagctgctttgaaaatccttgagaaagagattaaagat
gtgtttgctgcatatggaattgtggttgatcctcgacatctctccttggtgtcagactac
atgtgctttgaaggtgtttacaaacctttgaatcggtatggaatgcagtccaattcatcc
cccttgcaacaaatgacttttgaaacaagctacaagtttttgaaagaagcaactatgttg
ggatcccatgatgaacttctgtctccttctgcttgcctggtagtaggaaaagtcgtcaag
ggaggaactggcttatttgagcttaagcaaccactaaaatag
DBGET
integrated database retrieval system
