Pantherophis guttatus (corn snake): 117665133
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Entry
117665133 CDS
T07329
Symbol
THOC2
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03013
Nucleocytoplasmic transport
pgut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117665133 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
117665133 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117665133 (THOC2)
03041 Spliceosome [BR:
pgut03041
]
117665133 (THOC2)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117665133 (THOC2)
Spliceosome [BR:
pgut03041
]
Complex C
Other components
EJC/TREX
117665133 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117665133 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
UCP019236
Motif
Other DBs
NCBI-GeneID:
117665133
NCBI-ProteinID:
XP_060548126
UniProt:
A0ABM3ZIC1
LinkDB
All DBs
Position
Unknown
AA seq
1640 aa
AA seq
DB search
MRGSLSRRASRGRSPPSPLTSQGPSSFWHPGSPRHTGKMAAATSAMVAGAPAEWIRNWEK
SGKSEFLQLCRALSENATFRGVQQALYELAYHVIKGNLKHDQASNVLNDIIEFRDDMPSI
LADVFCILDIETSCLEEKSKRDQFMQLVLACLNLVSDTILKERLDPETLESLGLIKQSQQ
FNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSELILENIKSLIGCF
NLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMCEPQTLCHILGFKFKFYQEPNGETP
VSLYRVAAILLQHNLIDLEDLYVHLLPSDHAILEEHKREIGEAKLIVRKLTMVVLSSEKT
EEKEKEKEKEEEKMEKPPDNQKLGLLEAMLKIGDWQHAQSIMDQMPPFYATSHKPIALAL
CQLLHVMIEPLYRRVGVLKGAKGTPVPPLQNKRAPKPVEHFEDLRKEVFNMLCYLGPHLS
HDPILFAKVLRLGKAFMKEYQLDGNKQEDREKMEILFSCLLSITDQVLLPSLSLMDCNAC
MSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQIIDRAKYIMKRLTKENVKP
SGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANP
EKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVV
QKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLC
LLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVL
CNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQQKVHKYITSCELVMAPVHDA
VISLHLPKVWDDISPQFYATFWSLTMYDLAVPRGSYEREVNKLKVQMKAIDDNQDMPPNK
KKKEKERCTALQDKLLEEEKKQLDHVERVLQRLKLEKDNWLLAKSTKNETITKFLQLCIF
PRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFL
CCMLDTVTQWHSDKSVYEKECGNYPGFITVLRSSGYDAVNKADQLDYENFRHVVHKWHYK
LTKASVHCLETGEYTHIRNILIVLTKILPWYPKVVNLGQALERRVRKIYEEEKEKRPDLY
ALAMGYSGQLKSRKMVPENDFHQKDLPTRNAVPTMVQNGPGGAGLPPLTINAAKLEESTA
EETDKLKEKSQGAVKVVSKAANATPKVIASNGNTSKLVKEKEDKEKCGKEKEKEKKEKVP
AGTPEAKLLGKDGKDKPKEERANKEEKAREAKEKTPKADKEKEKIKREEKPFKEEKSKII
VTNAESKSMAEKEREKEPSREREVTKEMKSKEVIRGGGGGGGGGGGGGEKIPIAGSLKSP
VPRSETSDSEREQKRRKIDTHSSPSHSSSVKDNLSELKDSAVKHYVNHSAPALSKSKERE
VDKKDLDKSRERSREREKKDEKERKDRKRDHSNNDREVPQDSAKRRKEENGTTGSSKHSK
SESPSNSPPRSNEKEKEKNKSKSSSKEKSDSIKVEKMEKSSSGSKKESRHDKEKPEKKEK
RDSTGNKEEKKHHKSSDKHR
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgcggggctcgctttcccggcgtgcctcgcgcggccgttctccgccgtcccctctgacc
tcgcagggcccgtcgtcgttctggcatccgggctctccgcgccacacggggaaaatggcg
gcggcgacatccgcgatggtggcgggcgctcccgccgaatggatccgcaactgggagaaa
tccggcaagagcgagttcttgcagctgtgtcgcgcactttctgaaaatgcaacttttaga
ggtgtccagcaggccctctatgagcttgcgtatcacgttatcaagggaaatctaaagcat
gaccaagcatcgaatgttcttaatgatattatagaatttcgcgatgatatgccttccatt
ctggctgatgtattctgcatattagacatcgaaaccagttgtttagaagaaaagagcaaa
agagaccagttcatgcagctggtgttggcttgtttgaacctggtttccgatactatatta
aaagagcgtttggatccagaaactctggaatcattagggcttatcaagcagtcccagcag
tttaatcagaaatctgtgaaaataaagacaaaacttttttataagcaacagaaatttaat
ttattaagagaagagaacgaaggctatgcaaaactgattgctgaactgggacaagattta
tctggaaatatcactagtgaattgatcctggaaaacattaaatctttaataggatgtttt
aacctggatcctaaccgagtgttggatattatcttggaagtctacgaatgtcgaccagaa
tatgatgaattttttgtacctttaatagagtcgtatatgtatatgtgtgaacctcaaaca
ctctgccatatacttggattcaaattcaagttttatcaggaaccaaatggagagaccccg
gtctctttgtacagagtcgctgcaatccttttacaacacaacttaatagatctggaagat
ctttatgtgcatctcctgccatccgaccacgctatcctcgaggaacacaaacgggaaatc
ggggaggcgaaactaatcgtacggaaacttaccatggttgtgctctcgtccgaaaagacg
gaagagaaagagaaagaaaaggagaaggaagaggagaaaatggaaaagccaccagataac
cagaaactgggtttattagaagccatgttaaaaatcggtgattggcagcatgcgcaaagc
attatggaccagatgcctccgttttacgcaacttcacacaaacccatcgctctcgctctt
tgccagcttctccatgtgatgattgagcccctctatcgaagagtcggggtcctcaaaggt
gccaaaggaaccccagtcccccctttgcaaaacaagagagccccaaagccagtcgaacat
tttgaagacttaaggaaagaagtgttcaacatgctttgctatctcggcccgcatctctcc
cacgatcccattctcttcgcaaaagtcttgcgccttgggaaagctttcatgaaagagtac
cagttggacggaaacaaacaagaggacagagagaaaatggagatattgttcagctgcttg
ctgagtatcactgaccaggttctgcttccttctctttccctgatggactgtaacgcatgc
atgtctgaggaactctgggggatgtttaaaacatttccataccagcaccggtatcgtctc
tacggccagtggaagaacgaaacatacaatagccatccactgctagtgaaagttaaagct
cagataattgaccgagctaaatatataatgaagcgtttaacgaaggagaacgtaaagcct
tctggaagacaaattgggaaactgagtcacagcaacccaaccattttatttgactatatt
ttgtcccagatccagaaatacgataacctaataactccagttgttgattcattgaaatac
ctcacttcactaaactacgatgttttggcttattgcataattgaagcattggcaaatccc
gagaaggagaggatgaagcacgacgacactacaatttccagttggcttcagagcttagcg
agtttttgtggtgctgtttttcgaaaatacccaatagaacttgccggactcctccagtat
gtggcaaatcaactcaaggcaggaaaaagttttgacctcctcattttgaaagaagtggta
caaaaaatggccggaattgaaatcaccgaagaaatgaccatggaacagctagaagccatg
actggcggggagcagctgaaggcagagggaggatatttcggtcagatcaggaacacgaag
aaatcttctcagagattaaaagatgcccttctggaccacgatcttgccctcccgctgtgc
cttctcatggctcagcagcgcaacggcgtcatctttcaagaaggaggggagaaacatttg
aagctggtggggaagctctacgatcagtgccacgatactttggtacaatttggtggattt
ctggcgtctaatttaagcacagaggactatattaagcgagtgccttctatcgacgtcctc
tgtaacgaatttcacactcctcacgacgctgctttcttcctttcaagacctatgtacgcg
caccacatttcgtcaaagtacgatgagttgaagaaagcggaaaaggggaataagcagcag
cagaaagtccacaaatacatcacgtcttgtgagctggtgatggcgcctgttcacgacgca
gtgatctccttgcacctcccgaaggtctgggatgatatcagtccccagttctatgccacc
ttctggtccctgaccatgtacgaccttgcggtgccccggggtagctacgaacgggaagtc
aacaaactcaaagtccagatgaaagccatcgacgacaatcaagacatgcctcccaataaa
aagaagaaagaaaaagaacgctgcacagcccttcaggataaacttctggaagaggaaaag
aagcagttggatcacgtggaaagggtgttgcaaaggctgaagcttgaaaaggacaactgg
cttcttgcgaagtcgacgaaaaacgagaccataaccaagtttctgcaactgtgtatattt
cctcgctgtatcttttctgccatcgatgctgtttactgtgctcgctttgtagaactggtg
catcaacagaaaacacccaatttttccacactgctttgttatgaccgagtcttctccgat
atcatctacacagtagccagctgcactgaaaacgaagccagtcgatatggtagatttttg
tgctgcatgctagataccgtaacccagtggcacagcgacaaaagcgtatatgaaaaggaa
tgtggtaattatccgggcttcatcactgtactgcgatccagtggttacgatgctgtgaac
aaagccgaccagttagattacgaaaatttccgacacgtggtacacaaatggcattataaa
ttaaccaaggcgtccgtacactgtctggaaaccggggaatatacacatatcagaaatatc
ctgattgtgctgaccaaaattttgccgtggtatccaaaggtggtgaatctgggccaggcc
ttggaaagaagagtccgtaagatttacgaagaagagaaagaaaagagaccagacctatat
gcgttagccatgggctattctggccaactgaaaagtagaaaaatggttcctgaaaacgat
ttccatcagaaggaccttccgacccgaaacgcagtgcccaccatggttcagaacgggcca
gggggagcagggctgcctccgctcacgataaacgcagcgaaattggaagaaagcaccgcc
gaggagacagataagttgaaggagaagtcacagggcgcagttaaagtggtcagcaaagcc
gccaacgcgacgcccaaggtgatcgccagcaatggaaacaccagcaaacttgtcaaagaa
aaagaggacaaagagaaatgcgggaaggagaaagagaaggagaagaaagagaaagtcccg
gctggcactcctgaagctaaattactcggaaaagacgggaaggataagccaaaggaagag
agggcgaacaaagaagagaaggcacgagaagctaaggaaaagacaccgaaggctgacaaa
gagaaggagaaaatcaagagagaagagaaaccattcaaagaggaaaaatccaagattatt
gtgaccaacgctgagtccaaatcaatggcggaaaaggagagagagaaggagccatcaaga
gagagagaagtgaccaaggagatgaaatccaaggaagtcattagaggaggaggaggaggc
ggcgggggaggaggaggaggaggagagaagattccaattgctgggtccttgaagtcacct
gttccccggtcagaaacttcagattccgaaagggaacaaaaacgtcgcaaaatagatacc
cattcttctccatcacattcctcaagtgtaaaggacaacctcagcgaactcaaggattcc
gcagttaagcactacgttaaccactccgctccggcattgtctaaaagtaaggagagagaa
gtagacaagaaagatttggacaaatcaagggaaagatcccgagagagagaaaagaaagat
gaaaaggaaaggaaagaccgaaaaagggatcattcgaacaatgaccgcgaagttccccaa
gattcagccaagcgtcggaaagaggaaaacggaacaactggttcctccaagcacagtaag
agtgaaagtccttccaactccccccctcgttcaaatgagaaggagaaagagaagaacaag
tcaaaatcttcaagcaaggagaaaagcgattccatcaaagttgaaaagatggagaaaagc
tcttccggaagcaaaaaggagtccaggcacgataaagaaaaaccagagaaaaaagaaaaa
cgggatagtactgggaacaaagaagaaaagaaacaccataaatcgtcagacaagcacaga
taa
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integrated database retrieval system
