Pantherophis guttatus (corn snake): 117665146
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Entry
117665146 CDS
T07329
Symbol
PCDH20
Name
(RefSeq) protocadherin-20 isoform X1
KO
K16498
protocadherin delta 1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117665146 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgut01009
]
117665146 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgut04515
]
117665146 (PCDH20)
Protein phosphatases and associated proteins [BR:
pgut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117665146 (PCDH20)
Cell adhesion molecules [BR:
pgut04515
]
Cadherins
Protocadherins
117665146 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
117665146
NCBI-ProteinID:
XP_034272590
UniProt:
A0A6P9BYL3
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MRRRGNETRRSWPPALESSWRQGKRSRRLAMGQRSSPGSRRRRAPGQRTLPNVFIFLLFL
EPFNCFASYSRASELFYSINEGLPAGFLIGNLAQDLQLAEGEGKVRKQETEQWGKSPLSF
SFASQGLGSQYINLDNQTGILCTSAQEIDRETLCLEDNVGSTVVSSSSSSPLPSSESCLL
LLDVLVLPQEYFRLVKVKIAIHDINDNAPWFPVPQIHLSVPENSPVNTRLAIEHPAVDPD
MGTNGVQTYQLQENYGVFTLDVEENESGERTPYLIVMGTLDREATDQYVTLIIAEDGGIP
PLVGSATLTIGISDINDNCPQFNETQISVTIFGNSSIGLHIASVHAVDIDHGINAEISYS
YSQKVSFLSRTLFRLNESTGVIKLFKRINGDTPLLHRLSVLANGPGCIPAVITVLVSIIK
VTMRPPEVIPRFIANEAEGVVYLRELEPIHTPIAFFTIKDPDEKYKVDCYLEGDGPFQLT
PYQPYRNEYLLETTKALDYEVQQLYEVSVVAWNTEGFHVNKIIKVQVLDDNDNSPVFSEA
LVELSIEENNAPHAFLAKLHATDADSGERGQVSYFLGPEAPSYFSLDKVTGILTVSTQLD
REEREKYRYTVRAVDSGLPPRESIATVTLSVLDKNDNSPRFINKDFSFFVPENFPGFGEI
GVISVTDADIGQNGWVALSVVNRSDIFVIDTGKGVLRAKVSLDREQQSSYVLWVEAVDGG
DPPLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAIDNDTGMNA
VIAYSIIGRRGPRPESFKIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVM
VNLFVNDTVSNESYIESLLRRESDINIEEKEPQISIEPTHRRAEAVSCMPTLVTLSIISL
SSISLVTGMGIYICLRKGKKYHRGDEGLEVQIPLNGRIDLHRLEKKPVEISNI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgagggaatgagacgcggcgcagctggcccccagccctcgagtccagctgg
cggcagggcaagcggagccggcggctggctatggggcagcgatccagccctgggagcagg
aggaggagagcccccggtcagaggacgctgccgaacgtgttcattttcctgcttttcttg
gaaccgtttaactgctttgcaagctacagtcgggccagtgaactcttctacagcatcaat
gaaggactccccgctgggttcctcatcgggaatctagctcaggatttacagctggcagag
ggagaaggaaaggtgaggaagcaggagaccgagcaatgggggaagagtcctctttccttc
agctttgcctcccaaggactgggaagccaatacatcaacctggacaatcagacaggtatc
ctgtgcacctcagcccaggaaattgaccgagaaacactctgtttggaggataatgttggc
tccaccgtggtttcgtcttcttcttcttctccgcttccatcctccgagtcatgcttgctc
ttgctagatgttctggtgttaccccaggagtatttccgtctggtcaaagtgaagatcgcc
atccatgacatcaatgataacgcaccctggttccctgtgccgcagatacacctctccgtg
cctgaaaattcacccgtcaatacccggttagctatagagcatccggctgtggacccggac
atgggaaccaatggggtgcagacataccaactccaagaaaattacggggtttttacgttg
gacgtggaggagaatgaaagtggagagagaacaccttatcttattgtcatgggtaccctg
gacagggaggccaccgaccaatatgtcactcttataattgcagaggatggtggcattcca
ccactggtgggtagtgccacactcaccattggcatcagtgacattaatgacaactgtccc
cagttcaatgagactcaaatcagcgtcaccatctttggaaactctagcattgggttgcac
atagcttcggtccatgctgtggatatcgatcacggaatcaatgctgagataagctattcc
tacagccaaaaagtttctttcctgtcccgcaccctcttccgtcttaacgaaagtacggga
gtgattaagttattcaagaggattaatggtgacacacctcttctgcatcggctgagtgtc
ttggccaacggtcccggttgcatcccggcggtgataaccgtgttggtatccatcatcaaa
gtcaccatgagacctcctgaagtcattcctcgctttatcgctaacgaagcagaaggggtg
gtttatttgagagagttggaacccatccacacccccattgctttttttaccatcaaggac
cccgatgaaaaatataaagtcgattgctatttggagggggatggccctttccaattgacc
ccttatcaaccctatcgcaatgagtatcttttggagactaccaaggccttggattatgag
gttcagcagttgtacgaggtctcggtggttgcgtggaataccgaggggtttcatgtgaat
aaaatcatcaaagtgcaggttctggatgataatgacaactctcccgttttctctgaagcc
ttggtagaattatcaatagaggaaaacaatgccccccatgcatttttggccaaactgcat
gccacggatgccgacagtggagaaagaggccaagtgtcctatttccttgggcccgaggcg
ccttcctatttttccttagacaaagttactgggatccttaccgtttctacccagctggat
agagaggaacgtgagaaataccgctacaccgtccgagctgtggattctggcctgcccccg
cgagaatccatcgccaccgtgaccctctctgtgttggataaaaatgacaacagcccgaga
tttatcaacaaggatttcagtttcttcgtaccggagaatttcccgggctttggtgaaatt
ggagttataagtgtcaccgatgcagacattgggcaaaacggatgggtagccctttctgtg
gtcaacaggagtgatatttttgtgattgacactggcaaaggtgtgttgagagccaaggtc
tctctcgacagggaacagcagagctcctatgtcttgtgggttgaagcagtagatgggggt
gacccgcctttgtcctcgacggctaagatcaccatcctcttactagacatcaatgataat
ccccccttggttttgtttccccagtctaacatgtcttaccttctagtccttccttccacg
ttgcccggctctcctatcactgaagtctatgccatagataacgacaccggtatgaatgcc
gttattgcctacagcattatcgggaggagaggtcctcggccggagtccttcaagatcgac
cccaaaacaggcaacatcaccttggaagagtcgctcatgcaaaacgattacggcctgtat
cgccttctggtgaaagttagcgaccacggctatccggaacctctgcattccaccgtcatg
gtcaacctcttcgtcaacgacaccgtgagcaacgagagctacatcgaaagccttctgagg
agagagtccgatatcaatattgaggagaaagaaccccaaatttccatagagcccacccac
cggagagcagaggccgtgtcctgcatgcctactttggtgaccctctccataataagcttg
agttccatcagcctggtgacaggtatggggatttatatttgcctaaggaaggggaaaaaa
taccacagaggggacgagggtttggaagttcaaatcccattaaatgggagaattgaccta
catcggctagagaagaaaccggtggaaatttccaatatctga
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integrated database retrieval system