Pantherophis guttatus (corn snake): 117665280
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Entry
117665280 CDS
T07329
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgut03000
]
117665280 (SOX6)
Transcription factors [BR:
pgut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117665280 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117665280
NCBI-ProteinID:
XP_034272872
EnsemblRapid:
ENSPGUG00005007605
UniProt:
A0A6P9BNQ0
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSSKQATSPFASDGEGTTTQDLASQEQEDDNNEELVTSHLPLHTILHNKPHSEELPALVT
TIQPDSDWNSVISTQHRMESENNKLCSLYSFRNTSTSPHKPEESGRDRNELMTSVNFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSAMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGTKMPSTPQPPNTTGTLSP
TGMKNEKRGTSPVTQIKDDAAQPLNLSARPKTAEPVKSPTSPTQSLFPTCKTSPVNVGNK
SGIPSPIGATLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQQQP
HIDGKLPSLNSMGLNNCRTEKIRDNYLPFFMEDIKKASVVLKGCSVPPKNRKTLWRTGGE
RIEERTRFENLGPQLSGKPSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTG
GATVAEARVYRDARGRSSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR
WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRR
QEMRQFFTVGQQPQIPIATGTGVVYPGAITMTTTTPSPQMTSDCSSTSASPEPSIPVIQS
TYSMKTDSGSLAGNEMINGEDEMEMYEDFEDDPKSDYSSENEAHEAVAAN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaggccacctctccatttgcatctgatggagagggaacaacaacccag
gacttagcatcacaggagcaggaagacgacaacaatgaagaacttgtcacttcccatctg
cctctgcacaccatattgcacaacaaacctcactctgaagagctcccagctctagtcact
acaatccaaccagactcagactggaacagtgttatctcaactcagcataggatggagtca
gaaaataataagttatgttccttatattccttccgaaatacttctacctcaccacataag
cccgaagaaagtggtcgtgatcgcaatgagctaatgaccagtgttaattttggaactcca
gaacgccgcaaaggaagtcttgccgatgtggtggacaccttgaaacaaaagaaactagag
gagatgacgagaactgaacaggaggattcatcttgcatggaaaaactactttctaaagac
tggaaggagaaaatggagagattaaacacaagtgaactccttggagaaataaaaggtacc
cctgaaagcttagcagaaaaagaacgacagctctctgccatgattacccagctcatcagt
ttacgggagcagcttctggctgcccatgatgagcagaaaaagctggcagcatcacaaatt
gaaaaacagcggcagcaaatggatcttgctcgccaacagcaagaacagattgcaagacaa
cagcagcaacttctgcagcagcaacataaaatcaatctcctgcagcagcaaatccagcag
gttcaaggtcatatgcctcctctcatgatcccaatttttccacacgaccagcggacattg
gcagcggctgcagcagcccagcagggatttcttttccccccaggaataacttataaaccc
ggtgataactatcctgtgcagttcattccatcaacaatggcagctgctgctgcttctgga
ctcagccctttacagctccagcaactctatgccgctcagttggccagcatgcaggtatcg
cctggcaccaagatgccttccacgcctcagccgccaaatacgacagggacgctctcacca
actgggatgaaaaacgaaaagagagggaccagtcctgtaactcaaattaaggatgatgct
gcacagccactgaatctctctgctagacccaagacagcagaacctgtcaaatccccgacg
tcgccaacgcagagcctcttccctacgtgtaaaaccagccctgtgaatgtgggcaataaa
agtggaatccccagtcctattggcgcgactctgggaagaggatcttctctagacatcctt
tccagccttaactcacctgccctatttggggaccaggacactgtaatgaaagcaattcag
gaggctcggaagatgagagaacaaattcagcgggagcagcagcagcaacagcagcaacca
catattgatggaaagcttccatccctgaatagtatgggcctaaacaactgtaggactgaa
aagataagggataattatcttcctttcttcatggaagatataaaaaaggcttcagtggtc
ctgaaaggatgcagtgttcccccgaaaaatagaaagactctctggagaactggtggagag
agaatagaggaaagaacacgctttgagaatttaggcccacaactatcagggaaacccagt
gaagatggaaagctaggtccaggagtcattgatcttacaaggccagaagatgcagaagga
agtaaagcaatgaatggctctgcagctaaactacagcagtattattgttggccaacagga
ggtgctactgtggctgaagctcgagtctacagagatgcccggggacgaagcagcagtgag
ccgcacatcaaacgaccaatgaatgctttcatggtttgggcaaaggatgaacgcaggaaa
attcttcaagcttttcctgacatgcacaactccaacattagcaaaattcttggttcccgc
tggaaatccatgtcaaaccaagagaaacaaccttattatgaagagcaagcacgattaagt
aaaattcacctagaaaaataccctaattacaaatataaacccagaccaaaacgcacttgc
attgttgatggcaaaaaactgcgcattggagaatataaacaactaatgagatctcgacga
caggagatgaggcaattttttaccgtagggcaacagcctcagattccaattgccacagga
acaggagtggtctatcctggtgctattactatgacaacaactacgccatcgcctcagatg
acatccgattgctccagcacttctgctagtcctgagcccagcatccctgtcattcagagc
acttacagcatgaagacggacagtgggagcctggctggaaatgaaatgataaatggggaa
gatgagatggaaatgtacgaggactttgaggatgaccccaaatcagactatagcagtgaa
aacgaagcccacgaggctgtcgctgccaactga
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