Pantherophis guttatus (corn snake): 117665529
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Entry
117665529 CDS
T07329
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03420
Nucleotide excision repair
pgut04115
p53 signaling pathway
pgut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117665529 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
117665529 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
117665529 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgut04121
]
117665529 (DDB2)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117665529 (DDB2)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117665529 (DDB2)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117665529 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
NBCH_WD40
DUF6566
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
117665529
NCBI-ProteinID:
XP_034273416
UniProt:
A0A6P9C105
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MVEEELNKMGSRKQSKDEHLNPREHQSEKVSKSSGKRKRDHAEPDNELQAKKIFVRKTKQ
LQETGQACFGGSMFRNSRVAFHPWEMQKNIVHYVYQTMVGGTIGAQLKKCLQVPFVRSLY
LYRLFRTASPFDRRITVLEWHPMHPSTVAVGSKGGDIILWNYEVLNKTCFIKGIGAGGAI
TGMKFNPFNPNELYTSSVAGTTALQDFNGNTIRVMANTNDWDFWYCSVDVSATSRTVVTG
DNVGKVILLSTEGEKIWNLKLHKRKVTHVEFNSHCDWLLATASVDQTVKIWDLRNIKDKS
SCLHVLQHDKGVNAAYFSPTDGAKLLSTDQHNEIRVYSSSDWSKPQHSISHPHRQFQHLT
SIKATWHPRYDLIAVGRYPDPKFPGYTADELRTVDIFDGNSGEMLCQLQDPKASGIISLN
KFNPMGDTLASGMGFNILIWDRKVMIGKKQEDLMQAVKEQRIGLTNVPCQRGQRQRQSNT
ETNKFKTKLLSLELEDTKTKGKEYTVYTKRRKDPEDL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggaggagttgaacaaaatgggttctaggaagcagtcaaaggatgagcatctg
aatccacgtgagcatcaatcagaaaaagtgtcaaaatcatctggaaaaaggaagcgagac
catgcagaaccggataatgagttacaagcaaaaaaaatatttgtgaggaaaaccaaacaa
ctgcaagaaacaggacaagcttgctttggtggttccatgtttcgaaattcaagagttgcc
ttccatccatgggaaatgcaaaagaatattgtccactatgtttatcaaactatggtgggt
ggcactattggagcacagcttaagaagtgtctccaggtgccctttgtacggtctctctac
ttgtaccgtctgttccgaacggcaagtccctttgacagaagaattacagttttggaatgg
catccaatgcatcccagcacagtcgctgtgggctccaaaggaggagacatcatcctgtgg
aattatgaagtgctcaataaaacatgttttattaaagggattggagctggaggggccatc
acaggaatgaaatttaatccttttaatccaaatgagctgtacacatcatcagttgctgga
actactgccttgcaagattttaatggcaacacaatccgggtcatggccaataccaatgac
tgggatttctggtattgcagtgttgatgtatctgcaactagtcggactgtagtaacagga
gataatgtagggaaagtgattttgttaagtactgaaggtgaaaagatatggaatttgaag
ctgcacaaaaggaaagtaactcatgtggagtttaattctcattgtgattggctgctggct
acagcctctgtagaccagacagttaaaatctgggatctgagaaatattaaagataaatca
agttgccttcatgtacttcagcacgataaaggtgtcaatgcagcttatttcagcccaaca
gatggtgctaagctactgagtacagatcagcacaatgaaatccgggtttattcttcttct
gattggtccaaaccacagcattcgatttcacatcctcatagacagttccagcatctcaca
tctatcaaggcaacatggcatcctcgttatgatctcattgcagttggtcgttatccagac
cctaagttcccagggtacacagcagatgagctgagaactgttgacatatttgatggaaac
agtggagagatgctgtgtcaactacaagatccaaaggcatcaggcattatctctctcaat
aagtttaaccccatgggtgacaccttggcttcaggaatgggctttaatattctgatatgg
gaccgaaaagtgatgataggtaagaagcaggaggatctcatgcaagctgtgaaagagcag
agaattgggcttacgaacgtaccctgtcaaagaggacagaggcaaaggcaatcaaacaca
gaaacaaacaaattcaaaactaaactgctcagtcttgaattagaggataccaaaacaaag
ggcaaagaatacaccgtgtacactaagagaagaaaggacccggaggacttatga
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