Pantherophis guttatus (corn snake): 117665921
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Entry
117665921 CDS
T07329
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117665921 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117665921 (CPSF2)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117665921 (CPSF2)
U7-dependent histone pre-mRNA processing factors
117665921 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
117665921
NCBI-ProteinID:
XP_034274241
UniProt:
A0A6P9C380
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNILETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLADLARVPSPKVVLASQPDLDCGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNASEKVIDIELRKRVKLEGKELEEYLEKEKIKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISAMESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLTESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELRDDGEDT
EMQVDAPSSDSSAVAQQKAIKSLFGDDDKEICEESEIIPTLEPLPPNEVPGHQSVFMNEP
RLSDFKQVLLREGVQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagctaacaaccctctcaggggttcaggaagaatccgctctctgc
tacttacttcaggtagatgagtttcgctttttgttggattgtggctgggatgagaatttt
tctatggacatcattgattccctgaggaaacatgttcaccaggttgatgcagtacttctt
tcacatcctgatcctctgcacttgggtgctctcccatatgcagtaggaaagatggggttg
aactgtgctatttatgcaactattcctgtatacaaaatgggtcagatgttcatgtatgac
ctttaccagtcacgccataataccgaagatttcaccttgttcactttggatgatgtggat
gcagcttttgataaaatacaacaactaaaattttctcagattgtcaatttgaaaggtaaa
gggcatggtttgtcaatcactccactaccagcaggccacatgataggaggtacaatatgg
aaaatagttaaagatggagaagaggaaattgtttatgcagttgatttcaaccacaagagg
gagattcatttaaatggatgttccttggaaatgttaagtagaccttctttgctcatcact
gattcgttcaatgctacttatgtacaaccaaggcggaaacaaagagatgagcaactgcta
acaaatattttggaaacattgaggggtgatggaaatgtcctaatagctgtggacactgca
gggagagttttggaacttgcccaactgcttgatcaaatatggaggacaaaagacgctggt
ttaggcgtgtattccttggcacttttaaacaatgtcagctacaacgttgtggagttctca
aaatctcaggtggaatggatgagtgacaagctaatgaggtgctttgaagataagagaaac
aatcctttccagtttcgtcatctgtctctttgtcatggacttgcagatttggctcgtgtt
cctagtcccaaagttgttcttgctagccagccagatctggactgtggattttcaagggat
ctctttatacaatggtgtcaggatcccaaaaactctattattttgacgtacagaacaact
cctggaacactagcacggtttttaatagataatgcttctgaaaaagttatagacatagag
ctcaggaaacgtgtaaaacttgaaggaaaagaacttgaggaatacctggaaaaagaaaaa
atcaaaaaggaggcagcaaaaaagttagaacagtcaaaagaagcagatatagattccagt
gatgagagtgatgctgaagaggatattgatcaaccatctgttcataagaccaaacatgat
ctcatgatgaaaggtgaagggaatcgaaaaggaagcttcttcaaacaagccaaaaaatct
tatcctatgtttcctgctccagaggagagaattaaatgggatgaatatggagagattatc
aaacctgaggatttcctcgttccagaacttcaggcaacagaagaagaaaagaacaaatta
gaatctggccttacaaatggagaagaacctatggatcaagatttatcagatgttcctact
aaatgcatttcagcaatggaatcaatggaaataaaagctcgagttacatacatagattat
gaaggccgctcagatggagactccattaaaaaaattattaatcagatgaagccacggcaa
ttgattattgtccatggacctcctgaggccagtcaagatctcactgaatcttgtagagct
tttggagggaaagacattaaagtttacatgcccaaactgcatgaaaccgtagatgcaacc
agtgagactcacatatatcaagttaggttaaaagactccctagtcagttcccttcagttt
tgtaaagctaaagatgcagaacttgcatggatagatggagttctggacatgcgagtatca
aaagtagacacaggggtaattttggaagaaggggaactgagagatgacggtgaggacact
gaaatgcaagtagatgcaccatcttcagattccagtgctgtggcacagcaaaaggccatt
aaaagtctctttggtgatgatgacaaagaaatctgtgaggagagtgaaattattcctact
ttggaacccttaccacccaatgaggttcctggacatcagtcggtcttcatgaatgagcca
agattgtctgattttaagcaagttctgttgcgagaaggagttcaagctgaatttgtggga
ggagttctagtgtgtaataacttggtcgctgttcgcaggactgaaactggacgtattgga
ttggaaggttgtctctgtgaagatttctataaaattagagaccttttatatgaacagtat
gctattgtctaa
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