Pantherophis guttatus (corn snake): 117667040
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Entry
117667040 CDS
T07329
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03015
mRNA surveillance pathway
pgut03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117667040 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117667040 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117667040 (CPSF7)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
117667040 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
117667040
NCBI-ProteinID:
XP_034276091
UniProt:
A0A6P9BXP6
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Position
Unknown
AA seq
562 aa
AA seq
DB search
MRLNSVPFENGHPSNAAGKGNQIGSFGLRYFLAWRSIRKPEQAGFDKPEGAGRRRPLLWW
SEREREVRARFGPAWDCGPLRVPLFPPLPPDSLRGAPETMSEGVDLIDIYADEEFNQDSE
FSNTDQMDLYDDVLAASSQPSESCTSSSEPPIESRQEQSPKSNSKSPAILYTYSGLRNKR
AAVYVGSFSWWTTDQQLTRIIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKL
LELLPGMILNGDKIEVKLATRQNLAQFEAQARKRVPPMAHSRDSLDSLDGRATPTENAIP
PPRIEKPPVLPFFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPR
LPPHLSVPPPGSVPPALHLNPAFFPPPNAAMGPPPDAYSKASAPYNHSSRELGPLPPPVG
EAEFDDIMNRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLI
SSLKDCLHGIEAKSYSMGTGSSSSSSRKRHRSRDRSPSRSRESSRRHREVVHNEDRHEDY
FQERSREHERHRDRDRERDRHH
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttaattcggtcccgttcgaaaacggccacccgtcgaacgccgccgggaaaggg
aaccaaataggaagttttggtcttcgttactttcttgcgtggagaagcattagaaaaccg
gaacaggcgggattcgacaagccggaaggggcggggcggaggaggcccttactgtggtgg
agtgaaagagagagagaggttcgcgcgcgttttgggcctgcttgggattgtgggccttta
cgcgtgccgctcttccccccccttccccccgattctctccgtggcgctcctgaaactatg
tcggaaggagtagacctcattgatatctacgccgacgaggagtttaaccaggactctgaa
tttagtaatactgaccagatggatctatatgatgatgtgctagctgccagctcacaacct
tctgaaagttgcactagcagctctgagccaccaattgaaagccgccaagaacaatctcct
aagtcaaacagcaaatcgcctgctattttgtatacatacagtggactgcgcaataaaagg
gctgctgtttatgtgggcagcttttcttggtggacaactgaccagcaattgaccagaata
atccgttctataggtgtttatgatgttgtggagctgaaatttgctgagaacagagccaat
ggccaatctaaaggatacgcagaagtggttgttgcttctgagaactcagtccacaaactt
ctagagctgctaccagggatgattctaaatggagataaaatagaagtcaagttggctacc
cggcaaaaccttgcacagtttgaggcacaagcccgaaaacgggtgcctccaatggctcac
tcaagggattccttagactctcttgatggccgagcaactccaacagaaaatgctatccca
ccaccacgcattgagaaacctcccgttttacctttcttcaaccgtcctccctctgcgctt
cctctgatggggctgccccctccacccatacccccccctccaccactttcttcaagtttt
ggagttccccctccccctcccggtatccattaccagcatctcatgcctcccccaccccga
cttcccccccacttatctgtgccacctccagggtcagtgccacctgccctgcacctcaat
ccagctttcttcccacccccaaatgcagccatggggcctccaccagatgcctacagcaag
gcttctgcaccatataatcacagcagcagggagttgggcccattacctccacctgttggc
gaagcagaatttgatgatatcatgaacaggaaccgagcaatttccagcagtgccatatct
aaggctgtatctggggccagtgcaggggattacagtgatgctattgagaccctgcttaca
gccattgctgtaattaaacagtcccgtgtagcaaatgatgagcggtgtcgagtccttatc
tcttcacttaaggattgccttcatggcattgaagccaagtcttacagcatgggcactggc
agcagcagcagttcctcaagaaaaagacatcggtcacgtgataggtcgccaagtcggtca
cgtgagagcagtaggaggcaccgagaggtggttcataatgaagatcgacatgaggactat
ttccaagaaagaagccgggagcacgagaggcacagagacagggacagagaaagagatcgg
catcattga
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