Pantherophis guttatus (corn snake): 117667362
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Entry
117667362 CDS
T07329
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgut04515
]
117667362 (ROBO1)
Cell adhesion molecules [BR:
pgut04515
]
Immunoglobulin superfamily
ROBO family
117667362 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
117667362
NCBI-ProteinID:
XP_060542320
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MPDCRDSSTEKGRIRDNIVESAGELMGCKNRHNMKWKHYSFTVMGAILSLSWIHQLLGQL
IPDSDDLERRSDSGTALPTIDNEDNSLGYTGSRLRQDDFPPRIMEHPSDLIVSKGEPATL
NCKAEGRPVPTIEWYKGGERVETDKDDPRSHRMLLPTGSLFFLRIVHGRKSRPDEGVYVC
VARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKD
GSPLDDRDERITIRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKR
PSNLAVTVEDSAEFNCEARGDPVPTLRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGS
YTCVAENMVGKAEASATLTVQVVSEPPHFVVKPRDQVATLGRTVTFQCEATGNPQPAIFW
RREGSQNLLFSYQPPQSSNRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSITTKAYLE
VTDVIVDRPPPVIRQGPVNQTVAVDGTLILNCIATGTVIPIILWRKDGVLISTQDSRIKQ
LESGALQIRYAKLGDSGRYTCIASTSSGEATWSAYIEVQEFGIPVQPPRPTDPNLIPSAP
SKPEITDVRRNTVTLSWKPNLNSGATPTSYIIDAFSHAAGSSWQTVAENVKTETFAVKGL
KPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTNQGVDHKQVQRELGDVVLHLHNPT
ILSSSSIEVHWTVDQQSQYIQGYKVLYRPTVSSQGESEWLIFDVRTPTKNSIVIPELKKG
VNYEIKARPFFNEFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPED
TQNGMVQEYKVWCLGNESRYHINKTVDGSTFSLIIPSLVPGIKYSVEVAASTGAGAGVKS
EPQFIQLDSYGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKK
RNGLASSYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNINEPTTQPWLADTWPNTG
NNHNDCSINCCTSGNGNSDSNLTTYSRPADCIANYNNQLENKQTNLMLPESTVYGDVDLS
NKINEMKTFNSPNLKDGRFVNQPGQPTPYATTQLIQSNISNNVNSNSGDSNEKHWKPSTQ
QKQEVAPIQYNIMEQNKLNKDYRVNDNVTTIPYNQTYDQNTGGSYNSSDRGSSTSGSQGH
KKGAKTPKTSKQAGMNWAEVLPPPPVHPPPHNNSEDYNLSMNESYDHEIPCPLPPTRMYI
RQDELEEEDDERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEEIAHL
QHPPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADVEIVKMQNKR
LLLRGLEQTPASSVGDLESSVTGSMINGWGSASEDDNISSGRSSVSSSDGSFFTDADFAQ
AVAAAAEYAGLKVAKRQMQDSVAGHRHYHASHCPRPTSPVSTDSNMSAAVIQRVRPAKKQ
KHQQGHLRREVYTDDLPPPPVPPPAIKSPTAQSKSQVDIRPVMLPKLSSIEPRTERAVER
KGIGYKGKEGSDGCQHSDMWTCSGERRESQEQQSDSKLRGNKPARRDGTPAKTHLPPEDI
LPYCRPTFPTSNNTRDPSSSSSMSSRGSGSRQKAEQANLSRRNIAEMQVFGTYEQGEDED
ELQETES
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactgccgtgacagcagcacagagaaggggcgtatcagagataacattgttgaa
agtgctggtgaacttatgggatgcaagaacagacacaacatgaaatggaaacattattct
tttactgtcatgggagccatactcagcctatcctggatccatcagctgcttggtcaactt
attccagactctgatgacctagaaagaagaagcgacagtggcacagcacttcccaccata
gataatgaggacaattcgctgggctatacaggttcacgtcttcgtcaagatgatttccca
cctcgaattatggaacatccttcggatttaattgtttctaaaggggaaccagcaacactg
aactgcaaggctgaaggcagaccagttccaacgattgaatggtacaaaggaggagaaagg
gttgaaactgataaagacgatcctcgttctcatcggatgttgctaccgactggatcttta
tttttcttacgtatagttcatggccgcaaaagtaggcctgatgaaggagtttatgtctgt
gtagccaggaattaccttggtgaagctgtgagtcacaatgcatcattggaagtagcaata
ctgcgagatgacttcagacaaaacccttcagatgttatggtagcagtaggtgagccagct
gtgatggaatgccaaccccctcgaggccatcctgaacctacaatttcctggaaaaaggat
ggatctcctttggatgatagagatgaaagaattacaatcagaggaggaaagttgatgatc
acttataccagaaaaaatgatgcagggaaatatgtctgtgttggaacaaatatggttgga
gaaagagaaagtgaagtagcagaactaactgttcttgaaagaccatcatttgtaaagaga
ccaagtaatttagcagtaaccgtagaggacagtgcagagtttaattgtgaagcacgtgga
gatccagtgccaacactaagatggcgaaaggatgatggagaactacctaaatcaagatat
gaaatacgtgatgaccacaccttgaaaatccggaaagttatggcaggagacatgggttct
tatacttgtgttgcagaaaatatggttggaaaagcagaagcatcagcaactttaacagtt
caagttgtatctgaaccaccacattttgttgtcaaacctcgagatcaagtagctacatta
ggtagaactgtcactttccagtgtgaagcaactgggaaccctcaaccagcaatattttgg
cgaagagaaggaagccagaacttactgttctcctaccaacctccccagtcttccaaccgg
ttttcagtctctcagacaggtgatcttacaattacaaatgtccagagatctgatgttgga
tattatatctgccagactttaaatgttgcaggcagcatcacaacaaaagcatacttagag
gtaactgatgtgattgtagaccgacctcctccagtcattcgtcagggtcctgtcaatcaa
actgtagctgtagatggtactttaatactcaactgtatagctacaggcactgtcattccc
ataatcctctggaggaaagatggcgtccttatctctactcaggattctcgaatcaagcaa
ctggaatctggggcactacagattcgatatgcaaagctgggtgattctggtcggtacaca
tgtattgcctcaacctcaagcggtgaagcaacatggagtgcttacattgaagttcaagaa
tttggcattccagtgcagccaccacgacctactgaccctaatttgattcctagtgcacca
tcaaaacctgaaattactgatgtcagaagaaatacagtaactctctcatggaaacctaat
ttgaattcaggtgcaactccaacctcttatataatagatgccttcagccatgcagctggt
agcagctggcaaactgtagcagaaaatgtgaaaacagaaacatttgcagtaaaaggactg
aaaccaaatgccatttatctgttcctcgttcgtgcagccaatgcgtatggaattagcgat
cccagtcagatatctgacccagtgaaaacccaagatgttccaccaacaaatcagggtgtg
gatcacaaacaagtacaaagagagctgggtgatgttgtcctacatcttcataatccaaca
attctttcttcttcctctattgaagtacactggacagttgaccaacaatcccaatatatt
cagggatataaagttttgtacaggccaacagtttcatctcaaggggaatctgaatggttg
atttttgatgtaaggacaccaacaaaaaacagcattgtaattcctgaactcaaaaaagga
gtgaactatgaaattaaggctcgacctttttttaatgagtttcaaggagctgatagtgaa
gtgaaatttgccaaaactttggaagaagctccaagtgctcctccacaaagtgtttcagtc
accaagaatgatggaaatggcactgcaattgtggtaacttggcagcctcccccagaggac
acacaaaatggaatggttcaggaatacaaggtttggtgccttggaaatgaaagtcgatac
catataaataagacagtggatggttctacattttctctaataattccatctctagttcct
ggaattaagtatagtgttgaagtagcagcaagtactggagctggagctggagtgaagagt
gaaccacaatttattcagctagattcctatggaaaccctgtgtcacctgaagaccaagtc
agcttagctcagcagatttcagatgttgtaaaacagccagcattcattgctggaattggt
gctgcttgctggattattcttatggttttcagtatttggttatatcgccaccgaaaaaaa
cgaaatggtcttgccagttcttatgccggtatcagaaaagtcccgtcttttaccttcaca
ccaacagtaacatatcaaagaggaggagaagctgtaagcagtggaggcaggccaggtctt
ttaaacatcaatgaacctactactcagccctggcttgcagatacatggcctaatactggg
aataatcataatgattgttctattaactgttgtacatcaggcaatggaaacagtgacagc
aaccttactacttattctcgaccagctgactgtatagcaaattacaacaatcagctggag
aataagcaaacaaacttgatgttgcctgaatcaacagtttatggtgatgtggacctgagc
aacaaaatcaatgaaatgaaaacattcaatagtccaaatctgaaagatggaagatttgtc
aaccaaccaggacagcctactccatatgccactactcaacttatccagtcaaacataagc
aataatgtaaacagtaatagtggtgattcaaatgaaaagcattggaaaccatctacacaa
cagaaacaagaagttgcaccaattcaatacaacataatggaacaaaacaaattaaacaaa
gattaccgtgtaaatgataatgttacaactatcccatataatcagacctatgatcagaat
acaggagggtcctacaacagttcagacagaggaagcagtacatcagggagccaagggcat
aaaaagggtgctaaaaccccaaagacatctaaacaggctggaatgaattgggcagaagta
cttccaccacctcctgtacatccacctccccataataatagtgaagattacaacctctct
atgaatgaaagctatgatcatgagattccttgcccgttaccaccaacaagaatgtatata
cggcaggatgagctagaagaagaagatgatgaacgaggtcctacaccaccaattcgagga
gcagcttcatctccagcagcagtgtcctatagccaccagtctactgctactctaactcct
tctcctcaagaagagctgcagcctatgctgcaagattgtcaggaagaaatagcccatttg
caacacccaccagaccgacggcgtcaacctgtgagcccacctccacctcccaggcctatt
tcaccaccacatacttacggttacatttcgggacctcttgtatctgacatggacactgat
gcaccagaagaagaagaagatgaagcagacgtagaaattgtgaagatgcaaaacaaaagg
cttcttttgcgtggccttgaacagacacctgcttcaagtgtgggagatctggagagttct
gtgacaggttccatgatcaacggatggggttcagcctcagaagatgataacatttcaagt
ggacgatctagtgttagttcatcagatggatccttttttacagatgcagattttgcacaa
gctgttgcagcagcagcggaatatgctggtcttaaagtagcaaaacgtcagatgcaagat
tctgtggcaggccatagacattatcatgcctcacactgccctagacctactagtcctgtc
tccactgacagcaatatgagtgctgctgtaattcagagggttcgacctgccaaaaagcaa
aagcaccagcaaggacatctgcgcagagaagtctacacagatgatctaccgcccccacca
gtgccacctccagctataaaatctcctactgcccagtccaaatctcaagtggatatacga
cctgtgatgttgccaaagttgtcctctatagaaccaagaacagaaagagcagttgaaaga
aaaggaataggctataagggaaaagaaggctctgatggctgtcagcattctgatatgtgg
acatgttcaggggagcgtagagaatcacaggaacagcaaagtgatagtaagctaagagga
aacaaaccagcaagacgagatggcacaccagccaaaacacatcttcccccagaggatatt
ttgccatactgtagaccaacatttccaacatctaataataccagagatcctagttcttca
agctcaatgtcatccagaggatcaggaagtagacaaaaggcagagcaagcaaatttaagt
cgaaggaatattgcagaaatgcaggtatttggaacttatgaacaaggagaagatgaagat
gaattgcaggagaccgaaagctga
DBGET
integrated database retrieval system