Pantherophis guttatus (corn snake): 117667381
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Entry
117667381 CDS
T07329
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03013
Nucleocytoplasmic transport
pgut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117667381 (UPF3A)
03015 mRNA surveillance pathway
117667381 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117667381 (UPF3A)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117667381 (UPF3A)
mRNA cycle factors
P-body specific factors
117667381 (UPF3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
117667381
NCBI-ProteinID:
XP_060542409
UniProt:
A0ABM3Z201
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MKDDRPSTPETPLIGLESLGAAGHPLRTIAKARPIEPESWRLRFSENPHVACQRRRPPLR
GLRPPPPPPPSNLPPGKQQREEKRAALSKVVIRRLPPNFTKEQLEEQLHPLPAHDYFEFC
SSDPSLYPHLYSRAYINFRNPDDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKK
LKKKDAKSGSIEDDPEYRKFLESYCAEEEKICANPETLLGEIEAKTRELIARRTTPLLEY
IKNRKLEKQRIREEKREERRRRESEKKRLREDEKRKRREEERRKRKEAEKQKKIAEKEIR
IKLLKKPEKGDEQTTEKHREKEKGDIEDNKWEKSPGHGSLKSKPLEVPLKELKEKSQNDS
DKEQRDSERRFREKEPERQRYRLEDGRKHRTHYEFDKYVRRNEDEPKWEKGYNQDRGKKV
NYNYSFTVDTVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGIRIRTHMGPTSRFYDC
AEKTSQEVYDRRYEADNSAGGSSEKSEDVE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaccggcccagcacgcccgagacgcctcttatcggacttgagagcctgggc
gctgcgggacatcccttacgaacgatcgcaaaggctcggccaatagagccggagtcatgg
aggctccgcttcagcgagaatccccacgtcgcgtgtcagagacgccgtcctcctctccgg
ggcctccgccccccgccgccgcccccgccttccaacctgccgccgggcaagcagcaacgg
gaagagaaaagagcggcgctgagcaaagtagttattcgccggcttcctcctaactttact
aaggagcagctagaagaacaactccatccacttccagctcatgattattttgaattttgt
tcctctgatcccagtctttatccccacctctactcaagagcatatattaattttagaaat
cctgatgacatccttctttttagagatcgctttgatggctatgtcttcattgacaataaa
ggtttggaatatcctgctgttgttgaatttgcaccattccaaaagatttctaaaaagaaa
ctaaagaagaaagatgcaaaatctggaagcatagaagatgatccagaatatagaaaattt
ttagaaagttattgtgctgaagaagaaaaaatatgtgccaaccctgaaacacttctggga
gaaatagaagcaaaaacaagagaactcattgctagaagaaccaccccacttttggaatat
attaaaaatagaaaattagaaaaacagagaattcgagaagagaaaagggaagaaagaagg
agacgagaatcagaaaaaaaacggctaagagaagatgagaaacggaaacgtcgagaggaa
gaaagacgcaaaagaaaagaagctgagaaacaaaagaaaattgctgaaaaagaaataagg
attaagcttcttaagaaacctgaaaagggagatgaacagactacagaaaagcacagagaa
aaagaaaaaggtgatattgaagacaacaaatgggagaaatcaccaggacatgggagttta
aaatccaagccattggaagttcctctaaaggaacttaaggaaaaatcacaaaatgacagt
gataaagaacaaagagattcagagagaagatttcgtgaaaaagaacctgagagacaaagg
tatcggttggaagatggccgaaagcacagaactcactatgaatttgacaaatatgtgaga
cggaatgaagatgaaccgaagtgggagaaaggatacaaccaagaccgaggaaagaaagtg
aactacaactacagcttcactgtggacacagttgacaaactgggtaaagaggacaagtgt
gatgacatggcatccaaaaaggagcgcataagaaataaggatcgcccagccatgcagctg
taccaaccaggaattcgcattcgaacacatatgggacctacaagtaggttctatgactgt
gctgaaaaaacttctcaagaagtttatgacagaaggtatgaggcagacaactcagctggt
ggtagttctgagaagagtgaagatgtagaataa
DBGET
integrated database retrieval system
