Pantherophis guttatus (corn snake): 117667526
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Entry
117667526 CDS
T07329
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117667526 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117667526 (LIG3)
Enzymes [BR:
pgut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117667526 (LIG3)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
117667526 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
FMP23
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
117667526
NCBI-ProteinID:
XP_034276844
UniProt:
A0A6P9C2Z4
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MLLSLRAFLKAARSHSRSEKLAWLPKKTPHHQTGVLSFLNKGALPSTGLRYHQSGISSFP
LPAALHVCRLTSFCAASEMAEQRYCVDYAKRGTAGCKKCKEKILKGMVRIGKVVPNPFTE
SGGDMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQEAEKEMINQHISDLSSKPA
NTPKKKAVVQAKISPSGQITSPKKMPPVSSNPSPRKFSGFTAKSGTSEETASSGSSHKPS
LSTEKSDPKHKDCLLREFRKLCAMVADESSYNVKTQIIQNFLQKGTSGDGFRGDLYLTIK
LLLPGVIKSVYNLNDKQIVKLFSRIFSCSQEDMVRDLEKGDVSETVRIFFEPSRSCPPAA
KSLLTIQEVDEFLTQLSKLSKEEEQQNLLQEVASRCTANDLKCIIRLIKHDLKMNAGAKH
VLDALDPNAYDAFKASRNLHDVVERVLKNQQESQPGMKKILSVQAALMTPVQPMLAEACK
SIEYAMKKCPNGMYAEIKYDGERVQVHKKGDHFCYFSRSLKPVLPHKVAHFKDFIPKAFP
GGHSMILDAEVLLIDTKIGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPL
RERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIREGLEGLVLKDVKSIYEPGK
RHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPDSQKWCTVTKCA
GGHDDATLARLQKELDMVKISKDPSKIPDWLKINKNYYPDFIVPDPKAAPVWEITGAEFS
KAEAHTADGISIRFPRCTRIRDDKDWTTSTTLPQLRELYQLSKEKSDFLVVAAEEDNSTA
GSSGETEGQPKLSSPLKAAKQHSRKSPAKAKKPEASKLVDKSPLKKTEGKRGEKRKAPEM
EEDKRKQMLLDVFTGVKLYLPPSVEGFRKLKRYFVAYDGDLVQEYDATSATHVMERMEDN
PAAKYVSPEWIWECIRKRRLVTPC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcttctttctctcagagcttttctgaaagcagccaggagccatagcagaagtgaaaaa
ttggcctggctgccgaagaagacacctcaccatcagaccggtgttctcagcttcctgaat
aagggcgccttgccttcgactggcctccggtaccaccaatctggcatctccagctttccc
cttccagcagctttgcatgtttgccgtctgacatccttctgcgctgcctctgagatggca
gaacagcggtactgtgtggactacgccaagcgaggcactgctggctgcaaaaagtgcaaa
gagaagattctcaaagggatggtgcgcattgggaaagtggtgcccaatcccttcactgaa
tccggtggggacatgaaggagtggtatcatgtcaagtgcatatttgagaaactggaaaga
gctcgggccacgacgaagaagatcgaagatatcacagacctggaaggctgggaggaactg
caggaggctgaaaaggaaatgattaatcagcacatctcagacctttcttccaaacctgca
aacactccaaagaaaaaagctgttgtccaggcaaagatttctcctagtggacaaataaca
tcacccaagaaaatgcctccggtttcttcaaatccttcaccaaggaaattttcaggtttt
acagcaaagtcgggcacttctgaagaaacagccagctctggctcttctcacaagcccagt
ctgtccaccgagaagagtgatccaaaacacaaagactgtttgctgcgggaattcagaaag
ctgtgcgcaatggtggctgacgaatccagttataatgtaaaaactcagataattcagaac
ttcttacagaagggaaccagtggagatggctttcgaggtgatctctacctaaccattaag
ctactcttgcctggagtcattaaaagtgtttacaacttgaatgacaagcagatcgtgaag
ctcttcagtaggatattcagctgcagccaggaagacatggtccgagaccttgaaaagggt
gacgtttcggaaacggtgcggatcttctttgagccaagcaggtcttgccctccggctgcc
aagagccttttgacaatccaggaagtagatgagttcctgacgcagctatccaaactttcc
aaagaagaggagcagcagaatctactgcaagaagttgcatcgaggtgcaccgctaatgac
ctgaagtgcatcattcgactgattaaacacgacttgaaaatgaatgctggcgcaaagcac
gtacttgatgcattggaccccaatgcttatgatgctttcaaagcatcccgtaacctccat
gatgtggtggagcgagtgctgaagaaccagcaagaatctcagccaggcatgaagaaaatt
cttagtgtccaggcagccctgatgaccccagttcagcccatgctggctgaagcttgtaaa
tcgattgagtatgccatgaaaaagtgtcccaatggcatgtatgcagaaattaagtatgat
ggagaacgtgtccaagtgcacaaaaagggagatcatttctgctatttcagccgcagtctg
aagcctgttctccctcacaaggtggctcatttcaaggactttatccccaaggcctttcca
ggaggacacagtatgatcttggacgctgaggttcttctgattgacaccaagatagggaag
cctctgccttttgggacgctgggagtgcataagaaagctgctttccaggatgccaatgtt
tgcctttttgtctttgactgcatctacttcaatgacgtcagtttgatggacaggcctctg
cgcgagcgtcgcaaatttctccatgataacatggtggaaattcccaatcgaattctcttt
tcagagatgaagcatgtcacgaaagcttcagacctcgccgacatgatcaaccgagtcatc
cgggaagggctggagggattggtgctgaaagatgtgaagagtatttatgaaccaggaaaa
cgccattggctcaaagtgaagaaggactatctgaatgagggagcaatggcagacacagca
gacctggtggttttgggtgccttctatggccaggggagcaaaggtgggatgatgtccatc
tttctcatgggttgctatgatcccgacagccagaagtggtgcacggtgaccaaatgtgct
ggtggacatgatgatgccacacttgcccggctgcagaaggaattggacatggtgaaaatc
agcaaggatcccagtaaaattccagactggttaaagattaataagaactattatccagat
ttcattgttccagacccaaaggcagcaccagtgtgggagatcacaggcgctgaattctct
aaagcagaggcccacacagctgacgggatctcaatccgcttcccccggtgtactcgtatc
cgggatgacaaagattggactacctcgaccaccctcccacaactcagggagctgtaccaa
ttatctaaagaaaaatcggacttcttggtagtggcagcagaagaggacaactccacagcg
ggcagcagtggagaaactgagggccagcccaagttgtcttctcctctgaaggctgcaaaa
cagcattccaggaagtcccctgcgaaagccaagaagcctgaagccagcaaactggtagat
aaatctccactgaagaaaactgagggaaagcgaggagaaaaaagaaaagcacccgagatg
gaggaggacaaaagaaagcagatgctactggacgtattcactggggttaagctttatctt
cccccttctgtggagggtttcaggaaactcaagcgttattttgtagcctatgatggagac
ctggttcaagagtatgatgccacttcagcaacgcatgtgatggagaggatggaagacaac
ccagctgctaagtacgtctcccctgagtggatttgggaatgcatccgaaagagaagactg
gtgactccatgctag
DBGET
integrated database retrieval system
